QPDF is a C++ library and set of programs that inspect and manipulate the structure of PDF files. It can encrypt and linearize files, expose the internals of a PDF file, and do many other operations useful to end users and PDF developers.
MUMmer is a modular system for the rapid whole genome alignment of finished or draft sequence. This package provides an efficient suffix tree library, seed-and-extend alignment, SNP detection, repeat detection, and visualization tools.
Vipul's Razor is a distributed, collaborative, spam detection and filtering network. The primary focus of the system is to identify and disable an email spam before its injection and processing is complete.
Collectl is a light-weight performance monitoring tool capable of reporting interactively as well as logging to disk. It reports statistics on cpu, disk, infiniband, lustre, memory, network, nfs, process, quadrics, slabs and more in easy to read format.
KeePass Command Line Interface
KeePass Command Line Interface (CLI) / interactive shell. Use this program to access and manage your KeePass 1.x or 2.x databases from a Unix-like command line.
AMOS is a collection of tools for genome assembly
AMOS is a collection of tools and class interfaces for the assembly of DNA reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contigging, and assembly manipulation.
github: https://github.com/ThomasCX/defragfs The defragfs project aims on file-system/directory defragmentation of the Linux operating system, it is (currently) file-system independent and only CLI, hope further development could bring the GUI and better functionality.
Webtunnel is an HTTP tunnel with some unique features: it runs in the context of a web server; it uses simple requests/responses for proxy traversal; and it is multi-threaded to allow many parallel connections to many destinations simultaneously.
Snd is a sound editor
Snd is a sound editor.
CryptoPy is a pure python implmentation of cryptographic algorithms and applications. The algorithms are developed for readability more than speed. The collection now includes IEEE 802.11i specific algorithms that generated the test vectors for 802.11i.
A Perl script that, given the output of the Firefox extension Live HTTP Headers, will replay the script using Test::WWW::Mechanize.
GNU make compatible but reliable and simpler build tool
Makepp, a build program which has a number of features that allow for reliable builds and simpler build files, is a drop-in replacement for GNU make. It supports almost all of the syntax that GNU make supports, and can be used with makefiles produced by utilities such as automake. It is called makepp (or make++) because it was designed with special support for C++, which has since been extended to other languages like Swig or embedded SQL. Some features that makepp adds to make are: greatly improved handling of builds that involve multiple makefiles (recursive make is no longer necessary); automatic scanning for include files; rebuild triggered if build command changes; checksum-based signature methods for reliable builds, smart enough to ignore whitespace or comment changes; extensibility through Perl programming (within your makefile); repositories (automatically importing files from another tree); build caches (not recompiling identically what a user of the same cache already did
XSH is a powerfull command-line XML editing tool/programming language in the manner of Unix shell interpreters and line-oriented text editors like ed which can be used either interactively or for batch-mode XML processing.
Homepages for my projects: userinfo, pwmd, libpwmd, cboard, ncast, ezxradio and bubblegum. There are also code snippets, both VIM and EPIC scripts and more.
Accounting software for small and medium-size businesses, developed for the european style of bookkeeping. EekBoek has both a versatile, scriptable command-line interface (CLI), a GUI, and a programmable API. NL: Boekhouden.
Xuse manages requirements, use cases & other artefacts that drive software design. Xuse focuses on clear documentation & communication. It defines an XML data model for requirements & use cases with XSLT providing multiple derived views: HTML/SVG/PDF. Note there is no GUI for entering requirements, however another project (https://sourceforge.net/projects/xguse/) will provide a GUI.
Recursive mapping/discovery of network devices via CDP/OSPF
CLI based, recursive mapping/discovery of network devices via SNMP(CDP/OSPF/BGP MIBs). SNMP(LLDP MIBs), telnet, and SSH are to follow, along with multi-vendor support (right now only supports cisco devices). Requires Perl and Net::SNMP, Net::SSH, and Net::Telnet modules.
cpanspec generates spec files for Perl modules from CPAN for Fedora.
Wsmake is a make tool written in C/C++ for website development and maintenance. It features tag substitution, page ordering, and 'make'-like dependency checking.
A cross-platform interface for the *.mfj file format.
mobcalPARSER is a command line based PERL frontend/interface for MOBCAL with limited wrapper functionality. "MOBCAL - A Program to Calculate Mobilities" is available from Professor Martin F. Jarrold's webpage http://www.indiana.edu/~nano/software.html.
This is a collector site of tools and scripts for the digital forensics. http://scripts4cf.sf.net
DTDParse is a tool for parsing SGML and XML DTDs producing structured documentation or other output forms.
Learn Linux sysadmin from Windows PC using this Debian Virtual Box
An Oracle Virtual Box image, packaged as an appliance to be downloaded and run anywhere. Created on 32-bit Windows XP & Oracle Virtual box 4.2.6. The VM is a Debian Squeeze 6.0.7 i386. md5sum: 85ab2066b7381af12b741a3d4dedf6c9 This file is to be specifically used along with this other great project: http://nixsrv.com/llthw There is a 64bit Debian image similar to mine in that link above. To benefit those like me who still have 32bit machines, I have created and uploaded this image. This is your fast track to getting up and running in no time. I hope it benefits people with 32bit machines who want to take advantage of the tutorial ASAP. If you found the image helpful, please leave a short note of appreciation (and a thanks to the tutorial maker). I would like that very much. Thanks and Ciao.
slclust: a utility that performs single-linkage clustering with the option of applying a Jaccard similarity coefficient to break weakly bound clusters into distinct clusters. The slclust utility is written in ANSI C++.
Overview of pre-defined compiler macros for standards, compilers, operating systems, and hardware architectures.