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Even in the simplified two dimensional HP-model (hydrophob/polar) the prediction of proteinfolding is NP complete. We implement a brute force algorithm with serial and parallel execution to solve short inputs of HP sequences (0-1 bitstrings).
Selbst im vereinfachten zweidimensionalen HP-Modell (hydrophob/polar) ist die Proteinfaltung bereits NP-vollständig. Hier implementieren wir einen brute-force Algorithmus zur Lösung kurzer Eingabesequenzen (0-1-Bitstrings) für die...
Tecomp: A compiler for Eiffel (compliant with ECMA-367, ISO/IEC 25436). Tecomp is a commandline compiler. It is committed to implement standard Eiffel. Tecomp works on Unix and Windows systems.
The tecomp project is no longer under active development. Successor project: http://albatross-lang.sourceforge.net
Multi-functional batch sequence aligner incorporating Needleman-Wunsch, Smith-Waterman and Oommen-Kashyap algorithms along with compound alignment of secondary sequences.
Stores and retrieves files in an encrypted archive. Also manages files stored on CDs and DVDs. Other functions are incomplete. PLEASE NOTE: you need to download both an Objectify release and a Public Objects release.
The purpose of this project is to modify SmartEiffel to allow it to be used to create applications for mobile device platforms such as Symbian, BREW, and J2ME. Currently the codebase is based on SmartEiffel 1.0, but we are looking into moving over to Sma
Various commandline utilities to process files, one to replace strings in files, dump a file in hexadecimal little endian order, convert line feeds, etc.
Extended BON is a superset of BON, a clear and concise graphical and textual specification language for software systems. This tool suite consists of a scanner, parser, documentation generator, and design model checker for Extended BON.