Showing 43 open source projects for "one-wire"

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  • 1
    ToxTrac 2026

    ToxTrac 2026

    Free Animal Tracking Software

    ...It uses an advanced tracking algorithm and includes Preprocessing, Background subtraction, Advanced collision and occlusion management, Post-processing, and Filters. It is robust; very fast; and can handle one or several animals in one or several environments. The program provides useful statistics as output. ToxTrac can be used for fish, insects, rodents, etc. If used, please cite: Rodriguez, A., Molares-Ulloa, A., Andersson, M., and Brodin, T. (2026). ToxTrac 2026 (1.4). Universidade da Coruña. https://doi.org/10.5281/zenodo.20393895. ...
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    Downloads: 194 This Week
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  • 2
    MacPHREEQC

    MacPHREEQC

    macOS version of the USGS geochemical modeling code PHREEQC

    The macOS version of PHREEQC, a program developed by the U.S. Geological Survey for speciation, batch-reaction, one-dimensional transport, and inverse geochemical calculations
    Downloads: 8 This Week
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  • 3
    Habfuzz

    Habfuzz

    A command-line tool for data-driven fuzzy modelling

    Input 1 - A training dataset (multiple observations) of up to four variables (predictors) against one (response variable) Input 2 - A test dataset (multiple observations) of the same four variables with unknown response variable Output - Calculation of the response variable for each test observation using fuzzy logic or fuzzy rule-based Bayesian algorithms HABFUZZ is a habitat model, which can be used in ecohydraulic modelling applications for the calculation of the instream habitat suitability in various discharge scenarios in a simulated river reach. ...
    Downloads: 0 This Week
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  • 4

    ArcGIS-NRA-Tool

    National Responsibility Assessment for Endangered Species/Habitatats

    ...PLOS ONE 15(12): e0243135. doi: 10.1371/journal.pone.0243135
    Downloads: 0 This Week
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  • 5
    Fuzzy Ecospace Modelling

    Fuzzy Ecospace Modelling

    FEM allows users to create fuzzy functional groups for use in ecology.

    ...Following this, FEM classifies the functional entities from a second matrix (the Test Matrix) into the groups made using the Training Matrix, generating fuzzy membership values for each unit in the Test Matrix. These values are real numbers from 0 to 1, representing increasing degrees of “truth” regarding an organism’s membership in the fuzzy set (see main text). A value of 0 represents non-membership in the fuzzy set, and a value of 1 represents total membership in the fuzzy set. Values in between represent degrees of niche overlap.
    Downloads: 0 This Week
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  • 6
    BEAST

    BEAST

    BEAST is a tool dedicated to assess political goals of woody bioenergy

    ...BEAST is a data- and model-driven Decision Support System (DSS) evaluating woody biomass potentials from forests, hedges and trees outside forests as well as short rotation coppice (SRC). The latter one is modelled spatially explicit. This opens the possibility to identify prefered areas for SRC production under different restrictions and goals. Forest wood and wood from outside forests are treated only aggregated.
    Downloads: 0 This Week
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  • 7
    Dynamic Linkage

    Dynamic Linkage

    Dynamic Linkage Social Aggregation Model

    This project will create a user-friendly modeling system for studying animal social aggregations. The model codifies the a new hypothesis that the animal's state, kinematics, and the group's emergent properties are dynamically linked together, with each one affecting the others. The model will be constructed using Object-Oriented MatLab.
    Downloads: 0 This Week
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  • 8
    A model of the water, C, nutrients and microbial communities of the Amazon River. This project is still in development, the code may not be functional at this time. Most recent code version is under Files, labeled ROCA-date
    Downloads: 0 This Week
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  • 9

    MED-FOES

    An Agent-Based Simulation of Invasive Pest Insects

    ...Thus the objective of this software is to estimate the time to local extirpation based on known ranges of developmental, survivorship and reproductive parameters, as well as assumed ranges of an eradication pressure parameter. For a complete analysis and estimate of time to extirpation one would execute a large number of individual simulations evenly distributed over parameter space to estimate the time at which an arbitrary percentage of the simulations show extirpation.
    Downloads: 0 This Week
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  • 10

    FFSM++

    French Forest Sector Model

    Given the importance of anthropogenic determinants in forest ecosystems within Europe, the objective of the FFSM++ model is to link the evidence arising from biological models with socio-economic determinants, where the expected returns of forest investments represent the main drivers. An (inventory-based) forest dynamic model is hence coupled with a (partial equilibrium) market module and a (micro-based) management one in a national level forest sector model for France (FFSM++). The model is fully open source (GPL3) with the sole exception that if you publish some document based on a modified version of FFSM++ you need to publish also the modifications you made.
    Downloads: 0 This Week
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  • 11
    Hydroponic Automation Platform (HAPI)

    Hydroponic Automation Platform (HAPI)

    Technologies for automating food production on various scales

    The Hydroponic Automation Platform Initiative (HAPI) develops and provides hardware and software components for automating food production using hydroponic, aquaponics, and precision agriculture techniques. High-yield production in urban settings is one of the primary goals. Artifacts include hardware design (mainly Arduino-based), firmware, management software and reporting modules.
    Downloads: 0 This Week
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  • 12
    SimAssem

    SimAssem

    For processing and/or simulating species assemblage data.

    SimAssem is a tool for investigating the performances of species richness estimators across widely ranging assemblages and survey designs. Assemblages are simulated by specifying the: 1) number of species, 2) total abundance of individuals, 3) abundance distribution, 4) spatial configuration, 5) species detection probabilities, 6) survey design, and 7) number of grid cells to survey (out of a square grid comprised of 10,000 cells). SimAssem also processes existing encounter data and formats existing and simulated encounter data for other programs. ...
    Downloads: 0 This Week
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  • 13
    PyRadMon

    PyRadMon

    Automated reporting of Geiger Muller counter readings to RadMon.org

    ...Just because the Cold War is "over" does not mean that there is no more threat of a radiological attack. In fact, the U.S. Homeland Security Council lists the "Detonation of a 10 Megaton Improvised Nuclear Device" as "Scenario #1" among the top 15 threats to American security. Or, if you do not believe that a nuclear bomb is likely, what about all the Chernobyl-style Soviet-era nuclear power stations still in service? The point is: let us work together as free people to jointly report and track radiation levels around the globe. Information is power--and more importantly, information can save lives. ...
    Downloads: 0 This Week
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  • 14

    OpenAQDN

    Open Air Quality Data Network

    Messing around with public live air-quality data, initially in London (UK).
    Downloads: 0 This Week
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  • 15

    eemod_dnsmod

    A detailed nitrogen model inside of a simple ecological model

    This is an simple ecological model for lakes and reservoirs that contains a very detailed description of the most relevant nitrogen processes. The model is not very complete, but the main intention is to develop a library to be coupled with other models and use the full-mixed model as a testing version. A lot of things can be improved. I will read all the suggestions but I cannot promise that I will include all of them. Every new part of the code will contain the name of the author. If...
    Downloads: 0 This Week
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  • 16
    MeteoStationNM

    MeteoStationNM

    MeteoStaionNM for weather station WS1080(WH1080) for Linux (Ubuntu).

    ...Application is not tested for Windows!!! Notice: You must set permissions of the USB device in the application USERS AND GROUP on the Ubuntu. User XXX and ROOT is need to be add to ONE group.REBOOT. v1.07 Improvements: New Icons and better algorithms for current weather. New configuration options such as font color and background color panel. Communication with the server is implemented, but only in test mode.
    Downloads: 1 This Week
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  • 17

    mesoFON

    mesoFON is an individual-based mangrove forest model, a KiWi extension

    mesoFON is an individual-based mangrove forest model. It is a Java implementation of the KiWi model done with RePast Simphony. It contains several new features: (1) You can add up to 10 species via the GUI. However, in principle, the number of species to be included programmatically is unlimited. (2) You can use a variety of growth functions via typing them in as a string on the GUI. (3) The model is transparent, sinc it comes with the Eclipse workbench of RePast.
    Downloads: 0 This Week
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  • 18
    Rachis, A Cross-platform Hierarchical Identification System. Rachis is an application for the cataloguing and identification of entities (taxa). It is being implemented from scratch, but is based heavily on the lessons learned from Taxabase.
    Downloads: 0 This Week
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  • 19
    Lizard Data Cleaner
    This software automates the data cleaning and error checking process of Lizard data logger (Activity Meter) CSV files while maintaining data integrity. It also provides the opportunity to clean and merge one or more lizards log files at once.
    Downloads: 0 This Week
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  • 20
    Android app to assist recorders and recording societies in making biological records
    Downloads: 0 This Week
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  • 21
    Webapplication to collect, store, display and share information about natural events in proteced areas.
    Downloads: 0 This Week
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  • 22
    MACROMS is a software to model the coastal ocean circulation and fish larvae transport for the USA Mid-Atlantic region, which covers estuaries and continental shelves of NYC, NJ, DE, MD, PA, VA and NC. Rutgers ROMS model is applied for this study.
    Downloads: 0 This Week
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  • 23
    MIMES is a suite of dynamic ecological economic computer models specifically aimed at integrating our understanding of ecosystem functioning, ecosystem services, and human well-being across a range of spatial scales.
    Downloads: 0 This Week
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  • 24
    Sandia National Laboratories’ (SNL) environmental assessment modeling tool helps optimize the design of MHK-turbine array layouts within ocean, tidal, and river systems to balance energy generation efficiency with environmental considerations. The new tool, SNL-EFDC, is an augmented version of US EPA’s Environmental Fluid Dynamics Code (EFDC) and includes; (1) a new module that simulates energy conversion (momentum withdrawal) by MHK turbine-like devices including commensurate changes in the turbulent kinetic energy and turbulent kinetic energy dissipation rate, (2) new, advanced sediment dynamics routines, and (3) augmented water quality modules. SNL-EFDC has been verified and validated against flume measurements of flow around sub-scale turbines and actuator disks.
    Downloads: 0 This Week
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  • 25
    A collection of python classes for computational ecology and evolutionary biology.
    Downloads: 0 This Week
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