Showing 24 open source projects for "bio-bwa"

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  • 1
    SBW (Systems Biology Workbench)

    SBW (Systems Biology Workbench)

    Framework for Systems Biology

    The Systems Biology Workbench(SBW) is a framework for application intercommunications. It uses a broker-based, distributed, message-passing architecture, supports many languages including Java, C++, Perl & Python, and runs under Linux,OSX & Win32. It comes with a large number of modules, encompassing the whole modeling cycle: creating computational models, simulating and analyzing them, visualizing the information, in order to improve the models. All using community standards, such as...
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    Downloads: 3 This Week
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  • 2
    Vappio is a framework for building virtual appliances that supports distributed data processing in cloud computing environments using Sun Grid Engine or Hadoop. The primary target application of Vappio is bioinformatics.
    Downloads: 0 This Week
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  • 3
    Ergatis is a web-based utility used to create, run, and monitor reusable computational analysis pipelines, utilizing the Workflow engine. It contains pre-built components for common bioinformatics analysis tasks.
    Downloads: 0 This Week
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  • 4
    Platform for parallel computation in the Amazon cloud, including machine learning ensembles written in R for computational biology and other areas of scientific research. Home to MR-Tandem, a hadoop-enabled fork of X!Tandem peptide search engine.
    Downloads: 0 This Week
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    Engage for Amazon Connect, the Pre-built Contact Center Platform

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  • 5
    Soaplab is a generator of Web Services providing a programmatic access to command-line (and other) applications on remote computers (an example of its usage is available at http://www.ebi.ac.uk/soaplab/)
    Downloads: 1 This Week
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  • 6
    This is a multi-threaded Java program that tries to maximise CPU utilization by separating and distributing the computational part of the work from the file reading and writing part by using separate threads.
    Downloads: 0 This Week
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  • 7
    Microbase is a Grid infrastructure for deploying massively parallel applications. Our notification-driven task scheduler supports the enactment of complex data processing workflows, such as those commonly used in bioinformatics.
    Downloads: 0 This Week
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  • 8
    A system based on the multiagent approach, to help the biologists with the manual annotation task on genome sequencing projects
    Downloads: 0 This Week
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  • 9
    Source code for the Chemical Informatics and Cyberinfrastructure Collaboratory project.
    Downloads: 0 This Week
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    Vivantio IT Service Management

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  • 10
    FastEST - A software tool for clustering Expressed Sequence Tags (EST). The motivation is to identify genes from DNA-fragments.
    Downloads: 0 This Week
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  • 11
    The primary goal of the JES is to develop Distributed Configuration Service for client/server,clusters,grids,agent based architectures.
    Downloads: 0 This Week
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  • 12
    Gridder is a group of portlets that simplify the use and administration of grid services. Especially for job submission management. Gridder also extends and documents the functionality of the OGCE Bundle. It is plenty of useful documentation.
    Downloads: 0 This Week
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  • 13
    MSF(Meta Services Framework) : a workflow system for Bio Grid environments
    Downloads: 0 This Week
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  • 14
    GridSweeper makes it easy to perform batch runs of scientific simulation programs on computational grids/distributed resource management systems.
    Downloads: 0 This Week
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  • 15
    OpenEMS™ is the multi platform Grid framework to seamlessly aggregate all your multi platform resources into a virtual super computer.
    Downloads: 0 This Week
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  • 16
    Sight provides a friendly interface to create and connect agents for bioinformatics. The workflow supports multiple responses to a single request, structure transforms, filters and request history access.Can talk with ordinary http servers (get and post)
    Downloads: 0 This Week
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  • 17
    Cluster Networks are a new style of neural simulation / neural network modeling, that models networks of neural populations ("clusters") that transform and transmit information using precisely-timed, graded bursts ("pulses" or "volleys") of firing.
    Downloads: 0 This Week
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  • 18
    IslandEv distributes a Genetic Algorithm (like <a href="/projects/jaga">JaGa</a>) across a network (see <a href="/projects/distrit">DistrIT</a>) using an island based coevolutionary model in which neighbouring islands swap migrating individuals every
    Downloads: 0 This Week
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  • 19
    The Java Batch System (JBS) is a batch queueing system in the tradition of NQS and PBS for internal (Java-based) and system batch jobs. Stand-alone operation and integration with existing batch queueing systems, initially OpenPBS, is supported.
    Downloads: 0 This Week
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  • 20
    The objective of the Life Sciences Identifier (LSID) project is to develop a reference implementation of the LSID standards proposal currently being developed by the Technical Architecture Group of the I3C (www.i3c.org).
    Downloads: 0 This Week
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  • 21
    Info Sapient will be an Open Source, Common License 0.5, 100% Pure Java based program that is a mechanism for the expression and execution of business rules.
    Downloads: 0 This Week
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  • 22
    A generalized and flexible pipeline management software.
    Downloads: 0 This Week
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  • 23
    A main aim of this project is to deliver an infrastructure for HL-7 v3 compilant messages exchange. This infrastructure should be based on existing real time queueing system such as Apache ActiveMQ. A product of this project does not include user interfa
    Downloads: 0 This Week
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  • 24
    EOS stands for Entity Oriented Search. The project is a toolkit to support EOS projects on a Lucene and Hadoop platform.
    Downloads: 0 This Week
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