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Toldiff is a diff tool that allows tolerable (insignificant) differences between two files to be suppressed showing only the important ones. The tolerable differences are recorded running the tool with an appropriate command line flag.
...You can then use a directory diff tool, like WinMerge, to review the changes.
See http://www.literateprogramming.com/autoduck.pdf or http://helpmaster.info/hlp-developmentaids-autoduck.htm for information about Autoduck.
See www.doxygen.org for information about Doxygen.