Cis-element prediction tool from microarray data
We developed a novel clustering-free method, microarray-associated motif analyzer (MAMA), to predict novel cis-acting elements based on weighted sequence similarities and gene expression profiles in microarray analyses. Simulation of gene expression was performed using a support vector machine and based on the presence of predicted motifs and motif pairs. The accuracy of simulated gene expression was used to evaluate the quality of prediction and to optimize the parameters used in this method. After optimization, MAMA accurately simulated more than 87% of gene expression. See Kakei Y, Ogo Y, Itai RN, et al. (2013) Development of a novel prediction method of cis-elements to hypothesize collaborative functions of cis-element pairs in iron-deficient. Rice 6(1): 22.
a&a - tcl script for eggdrop/windrop
a&a - tcl script for eggdrop/windrop @ http://ascript.info & http://bots.land, used for creating bots on IRC, botlending activity and/or just fun.
A BitTorrent Client
StyxTorrent is a BitTorrent client. A BitTorrent client is application that manages uploading and downloading of a torrent by following BitTorrent protocol, which is a peer to peer file sharing protocol used for distributing data of all size over internet. Besides basic operations of uploading and downloading some clients provide option to create torrent file on client system, so does StyxTorrent.StyxTorrent uses library named libtorrent (Arvid Norberg, Rasterbar Software) and Boost (Boost.org) to implement BitTorrent protocol which was very helpful as it reduced the development time and gave some air to work on BitTorrent client logic. Libtorrent & Boost are written in c++ and so is StyxTorrent. To be specific StyxTorrent in written in MFC (Microsoft Foundation Classes) and ATL (Active Template Library) which fall under Visual C++. MFC provides easy access to Windows API and some of wonderful features provided by Windows Operating System. Visual Studio 2008 was used as IDE .
You control a caveman...
Caveman Dan is out to find all the Rubies in the world! Use Xbox 360 controller or keyboard.
Simple 5 region thermostat with PIC16F690
Simple 5 region thermostat with PIC16F690 using NTC's as a sensors driving 5+1 relays. Thermostat do not use PID control but a simple on/off with hysteresis (like ordinary mechanical thermostat would - note that function in source that decides to turn heater on/off is called pid() but that's not how decision is made). Note that it's designed to measure 5 regions and control 5 groups of heaters but *all* of them are trying to reach *same* temperature. If a region goes too much off the set temperature alarm (+1 relay) will switch on. Firmware can be easily adapted to work as 5 thermometers (each region to have it's own temperature) but I did not find that useful. Uses nokia 3310 lcd to display informations. Source is written in CSC PICC C compiler Hex is in "Software" directory, note that HEX has commented lines at the end (;...), some programming applications do not know how to handle HEX with comment so just remove all lines starting with ; and it will program properly.
A bug-fixed/updated fork of The Urquan Masters HD with the remix music
Star Control II is a space adventure game that features role-playing elements alongside 2D combat and space exploration. It was a milestone for early PC gaming and a huge influence on many modern sci-fi games such as Homeworld and the Mass Effect series. Many consider it one of the greatest computer games of all time. UQMHD Remix is a fork of The Urquan Masters HD (aka the hi-res version of the open-source version of Star Control II) which fixes some outstanding bugs, improves some of the settings/backgrounds, makes the game easier to run for newbies, and enables the use of the higher-quality remix music from the Precursors remix project.
Enabled Work Space tools for all platforms and people
This is a project aimed at facilitating the sharing work - tasks - through a distributed network of work platforms and people. This can be perceived similar to crowd-sourcing - though this adds the value of continuous sharing of tasks between industry professionals, university students, graduates and school learners. The projects attempts to implement services that will enable the following screnario amongst the target users; - It is only through the formation of Forums - that we can enable learners, students, graduates and professionals - to formulate Projects - which will produce Services - that will create sustainable Industries from generation to generation. The project will be distributed in the form of a web-application service that will render its content for all communication devices like mobile phones, telephones, computers, television, radio, etc. The services will requires the recruitment and training IT students in Web Application Development Tools.
An encrypter/decrypter written on the weekends
A simple encrypter/decrypter written in C with a graphical user interface written in Python. This tool was written to help forums' users to have their credits for the files they uploaded by putting their usernames from each forum they are active. *This encypting software generates a symetric key based in the password. The lenght of the key is variable. The rule for the length is: (Num_Of_Chars_In_Passwrd)^2 bytes .