AMOS is a collection of tools for genome assembly
AMOS is a collection of tools and class interfaces for the assembly of DNA reads. The package includes a robust infrastructure, modular assembly pipelines, and tools for overlapping, consensus generation, contigging, and assembly manipulation.
The PDL module gives standard perl the ability to COMPACTLY store and SPEEDILY manipulate the large N-dimensional data sets that are the bread and butter of scientific computing.
AmphetaDesk is a cross-platform, highly customizable, news aggregator - it sits on your desktop, downloads the latest news that interests you, and displays them in a quick, easy to use and customizable webpage. No webserver required.
FTE is a text editor geared toward the programmer. Syntax highlighting for over 20 languages, plus configurability for many more, makes this a lightweight but versatile editor for any programmer.
The home of the Gene Ontology project on SourceForge, including ontology requests, software downloads, bug trackers, and much, much more.
Webtunnel is an HTTP tunnel with some unique features: it runs in the context of a web server; it uses simple requests/responses for proxy traversal; and it is multi-threaded to allow many parallel connections to many destinations simultaneously.
This Database Test Suite aims to create database workload test kits used to simulate heavy user loads for OLTP, Decision Support, and e-commerce database transactions. These test kits can also be used to gather performance results for Linux and other
smooth is an object oriented class library for Win32 and Linux written in C++. It's meant to become an alternative to toolkits like Qt.
ZPlet is an interpreter for programs using the Z-Machine virtual machine invented by Infocom for their interactive fiction.
CryptoPy is a pure python implmentation of cryptographic algorithms and applications. The algorithms are developed for readability more than speed. The collection now includes IEEE 802.11i specific algorithms that generated the test vectors for 802.11i.
innotop is a powerful monitor for MySQL queries and status information. It is now hosted at http://code.google.com/p/innotop.
pDonkey is the set of tools for manipulating eDonkey peer2peer protocol. The main goal of the project is to provide basic API for the protocol and to create open source server for eDonkey network.
Universe is a set of documents for a freely-available, text-based role-playing game, based on the SPI game of the same name published in 1980. The documents are hyperlinked PDF files; source code in LaTeX format and/or other formats is provided.
Homepages for my projects: userinfo, pwmd, libpwmd, cboard, ncast, ezxradio and bubblegum. There are also code snippets, both VIM and EPIC scripts and more.
Doc2pdf is an email robot that converts Microsoft Office attachments (.doc, .ppt, and .xls) to PDF. Next time you email a Microsoft Office document, CC doc2pdf. Doc2pdf will convert the attachment to PDF, and send it in a reply to all recipients.
IPdump is a tool to generate detailed packet header dumps from packet traces in LBNL's libpcap format (such as generated by tcpdump).
A minimal linux rescue distribution with the goals of being small, compatible and very usable. Features as a cozy shell and a multitude of partition rescue/editing tools all based on up-to-date releases like 2.4.x kernel with USB support etc.
Xuse manages requirements, use cases & other artefacts that drive software design. Xuse focuses on clear documentation & communication. It defines an XML data model for requirements & use cases with XSLT providing multiple derived views: HTML/SVG/PDF. Note there is no GUI for entering requirements, however another project (https://sourceforge.net/projects/xguse/) will provide a GUI.
The Iron Way, aka Simutrans Iron Bite, is a free, open source transport simulation game. It is a fork of the Simutrans project featuring a better UI for the game, both with visual and usability enhancements. It can run most of the known Simutrans graphics sets, but comes with three sets included, so that you can start playing right away without need to download and install further components. A secondary goal is to translate the remaing German in the source code to English.
Arcade Emulator for M68000, M68020 and Z80 based hardware. See http://www.rainemu.com for more information.
Web-ftp is a cgi ftp client which may be used through SSL to connect to a local ftp server securely, or allow people to ftp from behind a firewall that blocks ftp.
Recursive mapping/discovery of network devices via CDP/OSPF
CLI based, recursive mapping/discovery of network devices via SNMP(CDP/OSPF/BGP MIBs). SNMP(LLDP MIBs), telnet, and SSH are to follow, along with multi-vendor support (right now only supports cisco devices). Requires Perl and Net::SNMP, Net::SSH, and Net::Telnet modules.
It is a php web system to send newsletter without using database. It use text file to save the list of receiver. Only 2 php file, very easy to setup.
DTDParse is a tool for parsing SGML and XML DTDs producing structured documentation or other output forms.
An extremely configurable portable GUI email and news client for Windows/Unix (including OS X) with IMAP, POP3, SMTP, and NNTP support, SSL, flexible address database, Python scripting, powerful filtering, and many other features for advanced users.