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Alternative splicing event analysis tool
Monte Carlo Simulations of Asymmetric Exclusion Processes
A branch-and-prune method to find all solutions to systems of nonlinear equations. The number of variables must equal the number of equations. The variables must have proper lower and upper bounds. The solver has an interface to the AMPL environment.
ASP-CMS is aimed to be a good easy to use and manage web based content management system. It will include all possible features that a web application can have like a web portal. It will have good administration features.
Processes, decodes, displays, records and replays EUROCONTROL ASTERIX13 weekly downloads
ATGC is an application containing a pack of useful algorithms in user-friendly interface for aligning nucleotide sequences, searching consensus and restriction sites, predicting amino acid sequence, docking contigs and so on.
Novel Solexa (Illumina 1G) Base-Caller.
This library provides an Opensource ATPG API to build your programs on. The library implements a lot of template c++ classes and functions that provide Combitional/Sequential logic simulation, and fault simulation functionality(semi-PROOFS).4 weekly downloads
Background subtraction program and software to model exemplars.
AUVNetSim is a simulation library for testing acoustic networking algorithms, written in Python, making extensive use of the SimPy discrete event simulation package.
This is an another open-source search engine, which can be use for educational fields.
A full-featured, cross-platform CAD environment.
AbeGroup is a software package that will perform basic functions on algebraic groups. The first goal is to input a group, given the generators, and AbeGroup will determine whether or not the group is abelian. Further functionality will be added.
AAMS is a tool for creating simulations visually. It has a library of processing elements (PE), that you can drop on the sim designer.Connect pins between PE, in data path define the control path, and run the simulation. Supports distributed simulations
Representation method of abstract information based on hierarchical network of simplest nodes. Each node can represent both value and attribute. Network is able to accumulate, classify and learn information.
ActiveFolder can be integrated with existed scientific computation.
Physics simulation toys in Java. The focus is on systems simulation:mostly guidance/navigation systems, but also including hydraulic, electrical and life-support.
Integrates the Vlasov-Maxwell equations in three dimensions for multiple particle species and arbitrary physical geometries.
Automated Database-lookup and Sequence Analysis Tool for use specifically with BioPython. Used for obtaining Sequence and other Data from online databases and processing the data using open bioinformatics tools like BLAST and MEME.
AESOP (Advanced Encrypted Stackable Open Proxy) is a powerful application for creating encrypted TCP tunnels.
Advanced and Discrete Mathematics Library for Python
Experimental image processing program designed to locate buildings in an aerial view still image. GUI allows for quick adjustment of image processing parameters and viewing of results.
AgED - Analysis given Experimental Data
A demonstration of the result of using an agent based approach in software. Shows a swarm of icons representing agents that follow user selected rules.1 weekly downloads
Using an agent-based approach to simulate the evolution of a small town based on the actions of its residents.