Second Symthium Server
SIMM: Simultaneous Identification of Multiple Mutations
SIMM (Simultaneous Identification of Multiple Mutations) pipeline provides a workflow to align the clean reads to reference genome, call SNPs between mutants and reference genome, then genotype the SNPs and identify causal mutations from different mutants simultaneously without the sequencing information of wild-type progenitor. Individuals with mutant homozygous phenotype are bulked and sequenced to >20X, and then analyzed with SIMM to identify causal mutation(s) responsible for the mutant phenotype. Correction of sites within candidate region is required when necessary. SIMM has been proved to be efficiently in identifying causal mutations in rice and Arabidopsis. It can decrease the candidate SNPs to a few sites.
The Koozali SME Server is a simple and robust server gateway for SOHO
The Koozali SME Server is the open source community side of the original e-smith server. SME Server consists of a modified Red Hat / CentOS Linux installation, together with a number of server applications as well as the server management web panel. Its strengths are its ease to use for anyone able to use a web interface, and its robustness, giving the ability to recover its initial state even after any upgrade. The server is designed for Small Offices and Home Offices to act as a gateway with a firewall web and email services, but fits also home user needs or even the needs as a simple and robust server only in the cloud to host your website projects and emails.
Plugins and Addons for the Koozali SME Server
This project hosts the sources for addon packages ("contribs") for the 'smeserver' project. These packages are automatically built and released into the "smecontribs" repository. All contribs developers are welcome to add their packages here.
SYMBOL brings double entry financial accounting to your web browser. Includes Debtors, Creditors, Payroll, Timesheets, budgeting and multi-dimensional accounting. Using Apache, Perl and PostgreSQL with extra features including text versions of reports.
A collection of modeling tools for system comprehension. Includes 1) DEMOS2K - a semantically justified version of DEMOS 2) SAVANT - a tool for evaluating system availability 3) GOLDSTAR - an arbitrary reward calculation system.
Automatically retrieves the stories from several news websites, trims off extraneous HTML, and converts them into formats you can read on your Palm computing device for later reading on-the-move.
This is an extension of the Alexandria system or Sourceforge system.Which allows people to develop freely in an open source like manner. After deploying sourceforge at work, we found some minor things laking. IE : extra permission / samba intergration an
Speak Freely for Unix is an Internet telephony application which provides high quality voice grade audio with GSM and CELP compression and encryption with DES, Blowfish, and IDEA ciphers. It interoperates with Speak Freely for Windows and any RTP client
Task Automation and Schedule Knowledge : TASK TASK is an integrated system of a web front end to a database that is specifcally designed to give an organisation the ability to track projects, or tasks. TASK also provides automated email notification
See Matt Wright for PERL CGI scripts. Upgrade to Oracle8i if you need MD4/5 or binary operations for PL/SQL.
A free Hebrew spell-checker and morphological analyzer
hspell - Hebrew spellchecker
A set of tiny applications, shell scripts and other tools useful in ev
Tiny Applications Collection (or tinyapps) is a set of small tools which make everyday use of a Unix-based system even more enjoyable. The idea is to allow users to share their own tools that they find useful in their everyday use, and look at what others are doing in case there's something that may be of use. Usually putting out one or two files involves too many steps for anyone to bother, but here, tinyapps is a perfect place for such applications!
Tivo2dvd creates and executes the series of commands required to access, format, and burn television shows from a Series II Tivo directly to a DVD. It supports processing multiple shows at once, to a DVD with menus.
Tk is a GUI toolkit for Tcl. See Tcl project for releases and mailing lists. http://sourceforge.net/projects/tcl/ Bug reports to http://core.tcl.tk/tk/ Follow code development at http://core.tcl.tk/tk/
txsig is a perl script for choosing a random quote from a base of quote files written in Perl. txsig runs on Linux in perl and should run on any platform that has the required modules. txsig offers a more flexible implementation of the fortune program.
VariScan is a software package for the analysis of DNA sequence polymorphisms at the whole genome scale.
WPP is a small perl5 script that allows preprocessing of html files. You can define variables, which are abbreviations for longer constructs, and include common html fragments. It's useful for giving an uniform layout to different html pages.
You can now find us on GitHub: https://github.com/youssef11420/confort-de-lecture Confort de lecture (i.e. Visually Comfort) or CDL is a software which allows the visually disabled people accessing intranet and websites. The core technology of the software rests on a filter which displays the Web pages according user's disability. Facebook : http://www.facebook.com/Confortdelecture http://www.facebook.com/groups/310270469033652/ Google Plus : https://plus.google.com/103614147592864703282
The idea is to get a group of monitoring stations from around the world, and for each of them to run a tool which will report various statistics on how long it took to download a URL. These statistics will be available for download so that participatin
Win32::SystemInfo is a Perl module that can get total/free memory on Win32 systems, including installed RAM and page file. It will also access processor information, including family (386,486,etc), speed, name, vendor, and revision information.
A collection of Xchat scripts, will grow.
Yet Another Calendar
YaTC is Yet another Temperature Converter that's written in Perl, under the GNU GPL
Allows you to browse a directory tree and display all the images in it through a customizable HTML interface. Any new images added are automatically displayed in the photo album. Integrates with UBB/YaBB forums for user upload.