Search Results for "data file"

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. DeepVariant is a deep learning-based variant caller that takes aligned reads (in BAM or CRAM format), produces pileup image tensors from them, classifies each tensor using a convolutional neural network, and finally reports the results in a standard VCF or gVCF file. DeepTrio is a deep learning-based trio variant caller built on top of DeepVariant. ...

AllenNLP makes it easy to design and evaluate new deep learning models for nearly any NLP problem, along with the infrastructure to easily run them in the cloud or on your laptop. AllenNLP includes reference implementations of high quality models for both core NLP problems (e.g. semantic role labeling) and NLP applications (e.g. textual entailment). AllenNLP supports loading "plugins" dynamically. A plugin is just a Python package that provides custom registered classes or additional...