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A collection of Perl modules and programs for bioinformatics. Design intention is to make most common, straight-forward tasks in computational biology as simple, and portable, as possible.
FPlus is an application that implements several database theory algorithms such as Fmin, tableaux, normalization, attribute closure, key calculation, efficiency, etc.
Test the applet at:
http://fplus.sourceforge.net
Type 2-JDBC driver for MySQL and wrapper for native C-API. A type-2 JDBC driver combines Java and native (C-API) methods to access a database. Please use the Java mailing list at www.mysql.org for general discussion, but use sourceforge for bug reports.
Information Meta View (IMV) system attempts to create a web standard for information storage in a decentralized database. Information is stored as a graph like structure spanning several service providers.
Based on a subproject, called Gerbo, it does the object mapping of a Relational Database. It is like torque and object bridge, but simplier.
The full project will have a GUI to make instrospection in a already created database and create the OR. Java.
Secure Database Replication (DaRe) is a server/client program aimed to replcate databases over the Net, with as little effort as possible. The project began when I needed to replicate a corporate database running MS SQL Server 7 to a MySQL database.
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DMZ - the no-mans land between the business and IT. A multi platform, repository based suite of modelling tools handling requirements, modeling, data warehousing and etl. Starting with a modeling framework.
Portable shell (command line) program written in Java to access database servers that support JDBC. For the beginning mySQL, PostgreSQL, Microsoft SQL Server are supported.
SqlData is an easy to use plug and play tool, written entirelly in Java programming language, which gives the abbility to transfer data from any data source (eg text files, SQL servers etc ) to any data source.
The Registry Server (jUDDI) offers a mechanism for humans or software applications to advertise and discover Web services. The Java Web Services Developer Pack (Java WSDP) Registry Server implements Version 2 of the Universal Description, Discovery and I
This is basically a layer for the Object Bridge project that will allow you to use the JDO specs. This project may disappear if it's decided to join it with the OJB project, but for now, it will allow me and whoever else wants to help to get moving.
This project is a 3-tier Database Query Tool to written in java. The GUI client presents the user with an interface to enter text SQL Queries and view the results. The query server relays requests to the database and formats the response.
MooN will be:
A Development environment for large-scale, mission critical,
multithreaded, database-based client-server applications
MooN will eventually expand into a full featured, free ERP System
FTPSearch is a java-based program that garthers URLs from many ftps and stores them in database to provide search function. Currently Postgres and MySQL are available for data storage.
CUG user management: simple java api to create applications to support
basic system adminstration taks. Escpecially tailored for administration of
nds/groupwise servers with lang=dutch (NL) personal naming rules.
This is a web based Java Servlet/JSP application for small IT firms to track their computing equipment and other valuable assets for purposes of inventory, maintenance records, and insurance.
Java Object DBMS stores serialized java objects in a file with keys. The keys are automatically maintained. Heavy use of introspection minimizes programming burden. Future plans include transactions, network (RMI, SOAP) access.
This is a collection of Java based XML technologies allowing for the rapid production of XML Messaging based systems using Java. As an Example there is a (Swing/JDOM) GUI framework, a Message Driven Bean which allow for rapid production / consumption of
DBManager aims to be an Abstraction Layer for JDBC Databases. It hides all Database interaction in the Superclass (DBManager) the Superclass useses the Java reflection framework to gather Informations of Tables and Columns.