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PSIMAP is the Protein Structural Interactome MAP, a map of all the domain level protein-protein interactions in the Protein Data Bank (PDB). PSIsoft is an archive of the software used to generate and analyse PSIMAP.
JudoScript is a general-purpose, Java scripting, multi-domain scripting tool/language. It combines the powers of declarative scripting for many modern tasks and general object/procedural programming. It is simple, intuitive, practical and powerful.
CGNS++ is an object oriented interface to provide access to CGNS (CFD General Notation System) databases. It is similar to the existing C and FORTRAN interfaces provided by www.cgns.org, but uses an object oriented abstraction of the underlying SIDS.
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Midea is a robust c string api set with regex support, handling fixed width 8 to 64 bit character sets at runtime (no recompilation is required). Initialization routines convert multibyte encodings such as utf8.
This site is intended as a location containing a suite of tools to (1) Aid in the design of db APIs to be utilized in a J2EE environment and (2) generate stubs for the db API, Java classes and SQL DDL necessary to support the MVC pattern and the Data Own
PatientRunner is a mental health medical records system. Windows client software written in Delphi 7 connects to a MySQL database that contains progress notes, diagnoses, medications, and scales. User customized templates make note creation easy.
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Bobcat Open Source Software is an umbrella project of a number of open-source software projects developed at Ohio University, including, among others, a distributed process management system, a meeting scheduling tool, and a performance evaluation tool.
jLips is a lightweight Java persistence container that implements database persistence through Java interfaces through a defined field naming scheme. Can be used with any JDBC database. jLips has a very small footprint and a simple interface.
JavaMatch is an engine that can search inside a runtime Java data structures, and look for objects that best match the criteria that you specify. The extensive query mechanism allows for highly customizable tuning of your match queries.
TM4 is a suite of applications for managing and analyzing microarray data. TM4 provides data storage and tracking, image analysis, normalization, data filtering, clustering and statistical analysis capabilities. Includes MADAM, Spotfinder, MIDAS, and MeV.
Mirage implements an complete 100% transparent Object Relational mapping for Java. It builds the database schema incrementally, to support incremental development and refactoring as it happens in Extreme Programming.
UserStory-FeatureTracker is an Access database for tracking eXtreme Programming projects with an easy to use interface. Built to be easy to adapt to other agile development processes. Tracks: projects, iterations, stories/features, questions and tasks.
DataBaseOne is a proyect for the generation of a small and "not that robust" Database Engine in C++ oriented to small and medium applications like games, and small and medium companies. The final product should be a static library OS Independent.
OntoCardio is an initiative to build ontologies for the legacy Cardio Database (Resource of bioinformation on cardiovascular diseases). SMI's Protege and its OWL plug-in has been adopted as the ontology construction and programming framework.
Potnia is a subject gateway software, developed for scientific directories, including journals, papers, bibliographic databases, research webs and so on. Database structure is compliant to Dublin Core Metadata Set
Atomatrix is a multithreaded execution system of atomic matrices with a dynamic compiler and a network eviron. It is the next generation object-orientated environment. XML, MUD-OO CLI, GnucDNA support, windows and many subprojects are built-in.
A translator that converts information models written in ISO-10303-11 EXPRESS to DAML+OIL/OWL (e2ont). The software extends the OSEXPRESS parser. DAML+OIL or OWL code is obtained using the Jena2 Semantic Web framework.