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mx is a Ruby/Rails code base with broad application in evolutionary biology, it includes general functionality for matrix handling, sequence management, ontology construction, specimen handling, taxonomic catalogs, taxonomic descriptions and more
Ruby Research Wiki (RRiki) can be used to keep notes and organize references for research. It uses a browser interface, an intuitive plain text formatting language (markdown), and facilities to cross-reference and hierarchically organize notes
Law Leecher is a multi-threaded web crawling tool which extracts laws from the EU law database PreLex (http://ec.europa.eu/prelex/). It's written in Ruby.
A database schema and web application to archive, search, share, and download data of maximum body sizes of different taxonomic groups during the history of life on earth.
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REMO == Remo Edits Makello Online: you can -- either with a webbrowser or a face-to-face Ruby application -- define SQL tables, links & indexes. REMO turns this into the framework of an application to manage the data (first sales data, so Makello).