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DocDB is a powerful and flexible collaborative web based document server which maintains a versioned list of documents. Information maintained in the database includes, author(s), title, topic(s), abstract, access restriction information, etc.
eubirdb is a bird(watchers) DB for name translation (scientific,it,en,fr,de,sp,nl) and retrieval, wants to be a base for birdwatchers (and ornithologists) software&data (checklist,img,...). Currently for EU(ring) aims to worldwideness. See forums for mor
TreeBASE is a database and web front end that stores phylogenetic trees and the data matrices used to generate them. The current iteration comprises a complete rewrite of the schema and web layer, and will include a web services layer.
Adds perl capability to the webserver Aolserver. A perl script can: return content, get other web pages, make SQL queries and more. Planned: full access to aolserver api (in progress: this is the base layer); and a second, easy-to-use layer on top.
ClinStudyWeb is designed to provide a flexible infrastructure for managing patient and assay data from clinical studies. It uses a plugin system for study-specific web forms and arbitrarily complex test classifiers, and supports XML import/export.
SchemaForms is a toolkit for building HTML form from an XML data file and an XML-Schema specification. Supports basic data types (string, checkbox, enumeration,..) but is easily extensible to custom data types.
ForeRunner X01 toolkit provides an easy access to Forerunner 201/301/305/305E GPS-units. There are multiple command line tools to read data from GPS into database and tools to export data in different formats like gpx and tcx.
Instant CRUD web front-end, featuring auto-discovery of the data dictionary for an RDBMS source.
Provides a basic CRUD web interface in minutes without coding and allows a great deal of flexibility for enhancements.
CRUD now, code later.
Business intelligence tool to create reports, drill-down into an aggregated data set (database table or view) and define available data points without coding.
meBiblio was specially developed as a small and accessible Python-based bibliography tool.
meBiblio can organize your reference library, allows easy search in your references and permits immediate retrieval and examination of digitally stored literature items. It connects to online catalogs as PUBMED to retrieve data.
...The key feature of the software is that duplicate files should be detected, and incoming files have an MD5 checksum automatically generated. All upload details, including timestamp, uploaded-by, checksum, filename and location are all stored in a 2-table database. The software should not impact the FTP server software as it is run separately. Coming soon will be a complementary application that will run as a daemon and scan the logging database on a regular basis. Specific processing/handling will be available on a per-user basis. The package includes all documentation and scripts to help set up the MySQL database.
This project aims the requirement of managed informations / documents in the treatment of patients, i.e. integrated care. The underlaying data model implements standards of electronic health recording, the project is based on a SQL db and Java EE framework. This is currently a student driven project for educational purposes.
TPoX is an XML database benchmark based on a financial application scenario. It is used to evaluate the performance of XML database systems, focusing on XQuery, SQL/XML, XML storage, XML indexing, XML Schema support, XML updates, and other aspects.
The Generic Genetic Studies Database (GGSD) is a web-based, relational database driven data management software package for the management of large scale genetic studies.
LANdb is a network administration CGI package written in Perl. It uses a RDBMS (ie MySQL or Oracle) to store information on all network hardware, connections, and connection statuses.
ASSD is a simple biological sample database focused on the storage of proteomics data. It tracks every processing step incl. results throughout a sample's lifetime. Next to proteomics data it can also store other results like FACS or Western Blots.
ProteoConnections is a bioinformatics platform tailored to address the pressing needs of proteomic analyses. Organise identifications, evaluate the the acquired dataset and accelerate biological interpretation using bioinformatics applications.
This software is a Perl Catalyst based electronic lab notebook (ELN) aiming for small biologic laboratories, that have no funding to invest into a closed source ELN.
Atomic OS is a responsive Web 2.0 operating environment & development platform. Based on AJAX techniques, it emulates/provides standard operating system features including a command-line shell, interpreter, filesystem, database access and GUI services.
The Princeton Protein Orthology Database (P-POD), developed by the Genome Databases Group at Princeton, computes and displays families of orthologs between multiple organisms.
This SourceForge page is no longer maintained. To find downloads, source code, or documentation for the PostgreSQL project, please see our home page: http://www.postgresql.org.
Free software tools released by the Virtual Institute for Microbial Stress and Survival, including WIST (a toolkit for LIMS development) and PCAPStore (a file repository for LIMS).