Showing 93 open source projects for "informatics"

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  • 1
    TM4 is a suite of applications for managing and analyzing microarray data. TM4 provides data storage and tracking, image analysis, normalization, data filtering, clustering and statistical analysis capabilities. Includes MADAM, Spotfinder, MIDAS, and MeV.
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  • 2
    Pymerase is a tool intended to generate a python object model, relational database, and an object-relational model connecting the two. However it has been extended to also output webpages and can be easily extended to output whatever else you might like.
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  • 3
    blaSTOR is a Microsoft Access database used to BLAST, store and analyze multiple nucleotide and protein sequences. It has an easy-to-use graphical interface that allows users to perform BLAST operations and organize their data quickly and effectively.
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  • 4
    OntoCardio is an initiative to build ontologies for the legacy Cardio Database (Resource of bioinformation on cardiovascular diseases). SMI's Protege and its OWL plug-in has been adopted as the ontology construction and programming framework.
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  • 5
    GeNetDB, contraction of Genetic Network Database, is a bioinformatic platform destined to the study of genetic regulatory networks. It contains in one place the data and the way to study them, providing the user an access to all tools needed for his work
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  • 6
    A Perl Extension for modeling enzymatic (biochemical) reaction networks
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  • 7
    The purpose of this project is to make available a variety of tools written in Python.
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  • 8
    GeneX is an gene expression database system with an integrated toolset that enables researchers to store, analyze, and communicate their data.
    Downloads: 1 This Week
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  • 9
    Talisman is an interpreter for a logical markup language. This language contains the content and logic of a web (or, in the future, Java Swing) based user interface, including arbitrary datatypes and processing actions.
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  • 10
    HalX is a LIMS (Laboratory Information Management System). It is meant to be able to keep track of all the experimental details of any type of biochemical, molecular biology or structural biology experiment (but not all are available now...)
    Downloads: 0 This Week
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  • 11
    A collection of Perl modules and programs for bioinformatics. Design intention is to make most common, straight-forward tasks in computational biology as simple, and portable, as possible.
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  • 12
    SPedit is a new curation environment for the Swiss-Prot and TrEMBL databases. For more information about these databases see http://www.expasy.ch/sprot/ and http://www.ebi.ac.uk/swissprot/
    Downloads: 0 This Week
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  • 13
    Biological research groups need to store and analyze large amounts of diverse data. LISA (LabInfoSystem:) stores this information in an easily accessible customizable web-based database. LISA requires PHP4 and MySQL. Keywords: Structural Biology, Genomics
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  • 14
    JReplica is a java distributed database replication system developed during a European Research Project in the department of Informatics of University "La Sapienza" of Roma under the supervision of Prof.ssa Catarci, Prof. Santucci and Ing. Curci.
    Downloads: 0 This Week
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  • 15
    A generalized and flexible pipeline management software.
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  • 16
    A .Net/SQL server implementation of a bioinformatics data warehouse.
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  • 17
    analytical framework for data analysis
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  • 18
    soaPDB is a clean way to Search, Organize, and get e-mail Alerts for saved PDB (Protein Data Bank) queries
    Downloads: 0 This Week
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