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DataNucleus provides Java data persistence to a range of datastores using JDO/JPA/REST APIs. *** Note that code development is no longer on SourceForge (code on SourceForge is for versions up to 3.3.5 only) ***
AMEN (Annotation, Mapping, Expression and Network) is a stand-alone, unified suite of tools to manage, explore and combine biological multifaceted high-throughput data such as annotation, chromosomal location, expression and interaction data.
openADAM is a web-based database management system for the large amount of genotype data generated from the Affymetrix GeneChip® Mapping Array and Genome-Wide Human SNP Array platforms