Search Results for "open cell"
Sort By:
Showing 24 open source projects for "open cell"
View related business solutions-
$300 Free Credits to Build on Google CloudPut your $300 in credit toward real workloads, then keep building with free monthly usage for 20+ products. No commitment and no charge until you upgrade.
-
99.99% Uptime for MySQL and PostgreSQL DatabasesCloud SQL Enterprise Plus delivers near-zero downtime with 35 days of point-in-time recovery. Supports MySQL, PostgreSQL, and SQL Server.
-
1
awesome-single-cell
Community-curated list of software packages and data resources
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc. List of software packages (and the people developing these methods) for single-cell data analysis, including RNA-seq, ATAC-seq, etc. Rapid, accurate and memory-frugal preprocessing of single-cell and single-nucleus RNA-seq data. Find bimodal, unimodal, and multimodal features in your data. Ascend is an R package comprised of fast, streamlined analysis functions optimized to... -
2
Wflow.jl
Hydrological modeling
...Successfully applied worldwide for analyzing flood hazards, drought, climate change impacts and land use changes, wflow is growing to be a leader in hydrology solutions. Wflow is conceived as a framework, within which multiple distributed model concepts are available, which maximizes the use of open earth observation data, making it the hydrological model of choice for data-scarce environments. Based on gridded topography, soil, land use and climate data, wflow calculates all hydrological fluxes at any given grid cell in the model at a given time step. -
3
RevoGrid
Powerful virtual data grid smartsheet with advanced customization
Support Millions of cells and thousands of columns easy and efficiently for fast data rendering. Easy to use. For large organizations managing massive datasets. Performance and scalability to handle even the most complex data tables. Rapid prototyping with intuitive and extendable codebase. Agility to build robust data-driven applications in no time. Quickly build elegant and efficient data grids. Lightweight yet powerful architecture lets you easily scale as your needs grow. -
4
nb-clean
Clean Jupyter notebooks of outputs, metadata, and empty cells
nb-clean cleans Jupyter notebooks of cell execution counts, metadata, outputs, and (optionally) empty cells, preparing them for committing to version control. It provides both a Git filter and pre-commit hook to automatically clean notebooks before they're staged, and can also be used with other version control systems, as a command line tool, and as a Python library. It can determine if a notebook is clean or not, which can be used as a check in your continuous integration pipelines.... -
Save Up to 91% on Cloud Compute With Spot VMsRun batch jobs at 60-91% off with Spot VMs. Long-running workloads get automatic discounts with sustained use.
-
5
Mercury
Convert Python notebook to web app and share with non-technical users
Turn Python notebooks to web applications with open-source Mercury framework. Hide code and add interactive widgets. Non-technical users can tweak widgets and execute notebook with new parameters. The core of Mercury is Open Source under AGPLv3. We provide Mercury Pro with additional features, dedicated support and friendly commercial license. Mercury is a perfect tool to convert Python notebook to interactive web application and share with non-programmers. You define interactive widgets for... -
6
ipychart
The power of Chart.js with Python
Create charts with Python in a very similar way to creating charts using Chart.js. The charts created are fully configurable, interactive, and modular and are displayed directly in the output of the cells of your jupyter notebook environment. Charts are fully interactive, you can hover it to display tooltips and select the information you want to see directly from the output cell of your notebook. All the types of charts present in Chart.js are exposed in ipychart. Even complex features such... -
7
D-Tale
Visualizer for pandas data structures
D-Tale is the combination of a Flask backend and a React front-end to bring you an easy way to view & analyze Pandas data structures. It integrates seamlessly with ipython notebooks & python/ipython terminals. Currently, this tool supports such Pandas objects as DataFrame, Series, MultiIndex, DatetimeIndex & RangeIndex. D-Tale was the product of a SAS to Python conversion. What was originally a perl script wrapper on top of SAS's insight function is now a lightweight web client on top of... -
8
atomes
Analysis, visualization, edition of 3D atomistic models
atomes is a Free (Open Source) cross-platform software licensed under the terms of the Affero GPL v3+ license. atomes is a toolbox developed to analyze, to visualize and to create/edit 3D atomic scale models. atomes also provides an advanced input preparation system for further calculations using well known molecular dynamics codes: - Classical MD : DL-POLY and LAMMPS - ab-initio MD : CPMD and CP2K - QM-MM MD : CPMD and CP2K atomes is developed by Dr. Sébastien Le Roux, research... -
9
GDS3D
Interactive 3D Layout Viewer for GDSII
GDS3D is a cross-platform 3D hardware accelerated viewer for chip layouts. Read standalone GDS files or use the Cadence plugin for easy integration with your Virtuoso environment. Developed by PhDs of the IC-Design Group, University of Twente, The Netherlands The GDS3D project is also hosted on Github: https://github.com/icdut24/GDS3D, but currently not actively maintained by us. Forks can be found at https://github.com/trilomix/GDS3D and https://github.com/skuep/GDS3D -
Demo Series - Small Business Backup By VeeamWatch this on-demand demo series and learn how to protect your Microsoft 365 data with clear, simple, actionable steps that are easy to implement for businesses of all sizes.
-
10
OmicsSuite
OmicsSuite: a suite for multi-omics analysis and visualization.
OmicsSuite (https://github.com/OmicsSuite/, https://omicssuite.github.io), original name BioSciTools, a desktop program developed based on Java 11, aims to make new exploration and contribution to the development of bioinformatics, and realize data analysis and visualization in the fields of sequence analysis, multimomics (transcriptomics, genomics, protein omics, metabonomics, single cell), microbiology, clinical, etc. The program inherits the excellent interactive components, perfect... -
11
coDDMaker
distributions and co-distribution 2D signal analysis
coDDMaker is a MATLAB® App Designer's software program for the guided analysis of the distributions and co-distribution of marker pairs in 2D image. -
12
DDMaker
Local Distribution Density Map Maker
DDMaker perform local density analysis and generates pseudocolor maps of the spatial distribution of imaged cellular structures in 2D images, starting from either RGB color, grey level or binary images. DDMaker local density analysis permit to selectively denoise the signal, visualize and quantify its distribution and threshold the image basing on local density. -
13
IPyPublish
Workflow for creating and editing publication ready scientific reports
A program for creating and editing publication-ready scientific reports and presentations, from one or more Jupyter Notebooks. Dynamically (and reproducibly) explore data, run code, and output the results. Dynamically edit and visualize the basic components of the document (text, math, figures, tables, references, citations, etc). Have precise control over what elements are output to the final document and how they are layed out and typeset. Also be able to output the same source document to... -
14
React-Datasheet
Excel-like data grid (table) component for React
This small component allows you to integrate an excel-like datasheet. By default, the spreadsheet handles keyboard navigation and copy-pasting of cells. This example computes expression underneath using mathjs. On an invalid expression, the cell changes color to show the error. Note that react-datasheet does not handle the validation nor the formula computation. Custom renderers allow you to add significant new capabilities to your sheets without requiring changes to react-datagrid itself.... -
15
ComplexHeatmap
Make Complex Heatmaps
ComplexHeatmap is an R/Bioconductor package by Zuguang Gu et al. designed to create highly flexible, complex, richly annotated heatmaps and related visualizations. It allows arranging multiple heatmaps, adding annotations, combining heatmaps, customizing colors, layouts, and integrating other plots. Often used in genomics/bioinformatics to show expression, methylation, etc., with sidebars, annotations, clustering, etc. Highly customizable layout: combining different heatmaps, arranging and... -
16
ngx-datatable
A feature-rich yet lightweight data-table crafted for Angular
ngx-datatable is an Angular component for presenting large and complex data. It has all the features you would expect from any other table but in a light package with no external dependencies. The table was designed to be extremely flexible and light; it doesn't make any assumptions about your data or how you: filter, sort or page it. It was built for modern browsers using TypeScript, CSS3 and HTML5 and Angular 8.0.0. This is the sister project of the angular-data-table that is designed for... -
17
A Matlab based project for tracking cell nuclei in 3D space over time from live imaging data. (Sample images and lineage data are available under "Files".)
-
18
This is the prototype version of software for robust detecting and segmentation of cell nuclei in 3D fluorescence labeled microscopy images. First release coming soon...
-
19
ncmerge
Merge multiple irregular NetCDF grids into an equirectangular grid.
ncmerge can combine cell-based irregular grids very quickly into a single equirectangular (Plate Carree) grid to simplify visualization workflows. It first creates a map file from coordinate grids, and then performs fast lookups when regridding data values. 3D time varying variables are supported. -
20
GoFigure2 is an open-source, cross-platform application for visualizing, processing and analyzing of multidimensional microscopy data. Users can visualize, segment and track cells through time, detect cell-division and ultimately generate lineages.
-
21
MATLAB GUI and code to map cell distribution around smooth spherical microcarriers beads from laser scanning confocal microscope images
-
22
Cscape is an application for visualizing and navigating through data from a Reverse Phase Protein Microarray (RPMA). Cscape uses the Google Maps API to map the RPMA data on top of an image of a cancer cell and its associated pathways.
-
23
Avenzoar is a one-year exploration of renal cell carcinoma morphology and its related single nucleotide polymorphisms (SNPa) as a method of automating diagnosis of cancer by using a computer-aided decision tree controlled by analytical statistics.
-
24
4-Dimensional Cell Simulator (4DiCeS) is a framework on hybrid (stochastic and deterministic) modeling and simulation of (whole) cell environments in 4D. The framework may incorporate any reaction and diffusion algorithms applicable in a 4D grid layout.
- Previous
- You're on page 1
- Next