Search Results for "memory"
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Showing 33 open source projects for "memory"
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OnlineStats.jl
Single-pass algorithms for statistics
OnlineStats does statistics and data visualization for big/streaming data via online algorithms. High-performance single-pass algorithms for statistics and data viz. Updated one observation at a time. Algorithms use O(1) memory. Algorithms use O(1) memory. -
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FileTrees.jl
Parallel file processing made easy
...When computing lazy trees, these values are held in distributed memory and operated on in parallel. -
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Coverage.jl
Take Julia code coverage and memory allocation results, do useful thin
...This is useful for measuring how much of your code base your tests actually test, and can reveal the parts of your code that are not tested and might be hiding a bug. You can use Coverage.jl to summarize the results of this tracking or to send them to a service like Coveralls.io or Codecov.io. Julia can track how much memory is allocated by each line of your code. This can reveal problems like type instability, or operations that you might have thought were cheap (in terms of memory allocated) but aren't (i.e. accidental copying). -
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DataFrames.jl
In-memory tabular data in Julia
DataFrames.jl is a powerful Julia package for working with in-memory tabular data. It provides a familiar, flexible, and efficient interface for handling datasets, making it easy to load, manipulate, join, and analyze structured data. With syntax inspired by data frames in R and pandas in Python, it offers intuitive tools while taking advantage of Julia’s speed and type system. The package is actively maintained by the JuliaData community, with contributions from over 200 developers worldwide. ... -
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Zenith
Sort of like top or htop but with zoom-able charts, CPU, GPU
In terminal graphical metrics for your *nix system written in Rust. The make file provides for building fully static versions on Linux against the musl C library. It requires musl-gcc to be installed on the system. Install "musl-tools" package on debian/ubuntu derivatives, "musl-gcc" on fedora and equivalent on other distributions from their standard repos. If one needs to build with NVIDIA support in a virtual environment, then it requires some more setup since typically the VM software is... -
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Space Radar Electron
Disk And Memory Space Visualization App built with Electron & d3.js
Space Radar Electron is an application that offers an interactive and comprehensive visualization of disk space and memory usage of your computer. Built with Electron & d3.js, it currently offers visualizations in the form of Sunburst, Treemap and Flamegraph charts. As it scans the contents of your disk, it produces a preview visualization so you can already see what's been scanned. It allows for drilldown of directories, breadcrumbs and navigation. -
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EzXML.jl
XML/HTML handling tools for primates
EzXML.jl is a package to handle XML/HTML documents for primates. This package depends on libxml2, which will be automatically installed as an artifact via XML2_jll.jl if you use Julia 1.3 or later. Currently, Windows, Linux, macOS, and FreeBSD are now supported. -
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InvertibleNetworks.jl
A Julia framework for invertible neural networks
Building blocks for invertible neural networks in the Julia programming language. -
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InMemoryDatasets.jl
Multithreaded package for working with tabular data in Julia
InMemoryDatasets.jl is a multithreaded package for data manipulation and is designed for Julia 1.6+ (64-bit OS). The core computation engine of the package is a set of customized algorithms developed specifically for columnar tables. -
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PartitionedArrays.jl
Vectors and sparse matrices partitioned into pieces
This package provides distributed (a.k.a. partitioned) vectors and sparse matrices in Julia. See the documentation for further details. -
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LinearOperators.jl
Linear Operators for Julia
Operators behave like matrices (with some exceptions - see below) but are defined by their effect when applied to a vector. They can be transposed, conjugated, or combined with other operators cheaply. The costly operation is deferred until multiplied with a vector. -
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Bumper.jl
Bring Your Own Stack
Bumper.jl is a package that aims to make working with bump allocators (also known as arena allocators) easier and safer. You can dynamically allocate memory to these bump allocators, and reset them at the end of a code block, just like Julia's stack. Allocating to a bump allocator with Bumper.jl can be just as efficient as stack allocation. Bumper.jl is still a young package, and may have bugs. Let me know if you find any. -
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SPX
A simple & straight-to-the-point PHP profiling extension
...Thus, you are free of manually instrumenting your code (Ctrl-C a long running command line script is even supported). Using a dedicated browser extension or command line launcher. Multi metrics capable: 22 are currently supported (various time & memory metrics, included files, objects in use, I/O...). Able to collect data without losing context. For example Xhprof (and potentially its forks) aggregates data per caller / callee pairs, which implies the loss of the full call stack and forbids timeline or Flamegraph based analysis. -
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Checkmate
Checkmate is an open-source, self-hosted tool
...The application continuously checks whether websites and services are accessible and performing optimally, generating alerts and reports when availability or performance degrades. It supports detailed infrastructure monitoring through an optional agent called Capture, which collects hardware metrics such as CPU, memory, disk usage, and temperature from remote machines. The system is designed to scale, having been stress-tested with more than a thousand active monitors without major performance issues. Checkmate also includes incident tracking and notification capabilities so teams can quickly respond to outages or anomalies. Overall, the platform serves as a comprehensive, developer-friendly alternative to commercial uptime and infrastructure monitoring tools. -
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Query.jl
Query almost anything in julia
...One can for example query any of the following data sources: any array, DataFrames, DataStreams (including CSV, Feather, SQLite, ODBC), DataTables, IndexedTables, TimeSeries, Temporal, TypedTables and DifferentialEquations (any DESolution). The package currently provides working implementations for in-memory data sources, but will eventually be able to translate queries into e.g. SQL. There is a prototype implementation of such a "query provider" for SQLite in the package, but it is experimental at this point and only works for a very small subset of queries. Query is heavily inspired by LINQ, in fact right now the package is largely an implementation of the LINQ part of the C# specification. ... -
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awesome-single-cell
Community-curated list of software packages and data resources
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc. List of software packages (and the people developing these methods) for single-cell data analysis, including RNA-seq, ATAC-seq, etc. Rapid, accurate and memory-frugal preprocessing of single-cell and single-nucleus RNA-seq data. Find bimodal, unimodal, and multimodal features in your data. Ascend is an R package comprised of fast, streamlined analysis functions optimized to address the statistical challenges of single cell RNA-seq. The package incorporates novel and established methods to provide a flexible framework to perform filtering, quality control, normalization, dimension reduction, clustering, differential expression and a wide-range of plotting. ... -
17
D-Tale
Visualizer for pandas data structures
...What was originally a perl script wrapper on top of SAS's insight function is now a lightweight web client on top of Pandas data structures. To help guard against users loading the same data to D-Tale multiple times and thus eating up precious memory, we have a loose check for duplicate input data. If you are running ipython<=5.0 then you also have the ability to adjust the size of your output cell for the most recent instance displayed. JupyterHub has an extension that allows to proxy port for user, JupyterHub Server Proxy. -
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Maxima -- GPL CAS based on DOE-MACSYMA
Computer Algebra System written in Common Lisp
Maxima is a computer algebra system comparable to commercial systems like Mathematica and Maple. It emphasizes symbolic mathematical computation: algebra, trigonometry, calculus, and much more. For example, Maxima solves x^2-r*x-s^2-r*s=0, giving the symbolic results [x=r+s, x=-s]. It can also calculate with exact integers and fractions, native floating-point, and high-precision big floats. Maxima has user-friendly front-ends, an online manual, plotting commands, and numerical... -
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GeoTools, the Java GIS toolkit
Toolkit for working with and mapping geospatial data
GeoTools is an open source (LGPL) Java code library which provides standards compliant methods for the manipulation of geospatial data. GeoTools is an Open Source Geospatial Foundation project. The GeoTools library data structures are based on Open Geospatial Consortium (OGC) specifications. -
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Social Network Visualizer
Social Network Analysis and Visualization software
Visit our new site: http://socnetv.org Social Network Visualizer (SocNetV) is a social network analysis and visualization application. You can draw a social network (graph/digraph) or load an existing one (GraphML, UCINET, Pajek, etc), compute cohesion, centrality, community and structural equivalence metrics and apply various layout algorithms based on actor centrality or prestige scores (i.e. Eigenvector, Betweenness) or on dynamic models (i.e. Kamada-Kawai spring-embedder) -
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libCEED
CEED Library: Code for Efficient Extensible Discretizations
...One of the challenges with high-order methods is that a global sparse matrix is no longer a good representation of a high-order linear operator, both with respect to the FLOPs needed for its evaluation, as well as the memory transfer needed for a matvec. Thus, high-order methods require a new "format" that still represents a linear (or more generally non-linear) operator, but not through a sparse matrix. -
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IndexedTables.jl
Flexible tables with ordered indices
IndexedTables provides tabular data structures where some of the columns form a sorted index. It provides the backend to JuliaDB, but can be used on its own for efficient in-memory data processing and analytics. -
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GTB: Graphics Toolbox
C++ libraries and apps for computer graphics and data visualization
The Graphics Toolbox (GTB) is a collection of C++ libraries and apps for computer graphics and data visualization. Wagner Correa initially created GTB as part of his Ph.D. research at Princeton University in collaboration with Professor Claudio Silva and Dr. James Klosowski. Several other researchers later contributed to GTB (see the AUTHORS file). -
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ComplexHeatmap
Make Complex Heatmaps
ComplexHeatmap is an R/Bioconductor package by Zuguang Gu et al. designed to create highly flexible, complex, richly annotated heatmaps and related visualizations. It allows arranging multiple heatmaps, adding annotations, combining heatmaps, customizing colors, layouts, and integrating other plots. Often used in genomics/bioinformatics to show expression, methylation, etc., with sidebars, annotations, clustering, etc. Highly customizable layout: combining different heatmaps, arranging and... -
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sf (Simple Features)
Simple Features for R
sf is an R package that implements “simple features” (standardized vector spatial data) for R. It allows spatial vector data (points, lines, polygons etc.) to be represented as records in data frames (or tibbles) with geometry list columns, and performs spatial operations (geometry operations, coordinate reference system transformations, reading/writing spatial data, integration with spatial databases etc.). It interfaces to GDAL, GEOS, PROJ libraries for robust operations. Reading and...
