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ArviZ.jl
Exploratory analysis of Bayesian models with Julia
ArviZ.jl (pronounced "AR-vees") is a Julia package for exploratory analysis of Bayesian models. It includes functions for posterior analysis, model checking, comparison and diagnostics. -
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TIGRE
TIGRE: Tomographic Iterative GPU-based Reconstruction Toolbox
TIGRE is an open-source toolbox for fast and accurate 3D tomographic reconstruction for any geometry. Its focus is on iterative algorithms for improved image quality that have all been optimized to run on GPUs (including multi-GPUs) for improved speed. It combines the higher-level abstraction of MATLAB or Python with the performance of CUDA at a lower level in order to make it both fast and easy to use. TIGRE is free to download and distribute: use it, modify it, add to it, and share it. Our... -
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Digital Earth Australia notebooks
Repository for Digital Earth Australia Jupyter Notebooks
The knowledge hub brings together information about Digital Earth Australia’s products and services, allowing you to utilize our free and open-source satellite imagery archive. Browse our catalog of data products to find supporting information and ways to access the data. The Digital Earth Australia notebooks and tools repository (dea-notebooks) hosts Jupyter Notebooks, Python scripts and workflows for analyzing Digital Earth Australia (DEA) satellite data and derived products -
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libCEED
CEED Library: Code for Efficient Extensible Discretizations
libCEED provides fast algebra for element-based discretizations, designed for performance portability, run-time flexibility, and clean embedding in higher-level libraries and applications. It offers a C99 interface as well as bindings for Fortran, Python, Julia, and Rust. While our focus is on high-order finite elements, the approach is mostly algebraic and thus applicable to other discretizations in factored form, as explained in the user manual and API implementation portion -
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Weights and Biases
Tool for visualizing and tracking your machine learning experiments
Use W&B to build better models faster. Track and visualize all the pieces of your machine learning pipeline, from datasets to production models. Quickly identify model regressions. Use W&B to visualize results in real time, all in a central dashboard. Focus on the interesting ML. Spend less time manually tracking results in spreadsheets and text files. Capture dataset versions with W&B Artifacts to identify how changing data affects your resulting models. Reproduce any model, with saved... -
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electricityMap
A real-time visualisation of the CO2 emissions of electricity
Real-time visualization of the Greenhouse Gas (in terms of CO2 equivalent) footprint of electricity consumption built with d3.js and mapbox GL. Real-time data is defined as a data source with an hourly (or better) frequency, delayed by less than 2hrs. It should provide a breakdown by generation type. Often fossil fuel generation (coal/gas/oil) is combined under a single heading like 'thermal' or 'conventional', this is not a problem. Citizens should not be responsible for the emissions... -
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CounterfactualExplanations.jl
A package for Counterfactual Explanations and Algorithmic Recourse
CounterfactualExplanations.jl is a package for generating Counterfactual Explanations (CE) and Algorithmic Recourse (AR) for black-box algorithms. Both CE and AR are related tools for explainable artificial intelligence (XAI). While the package is written purely in Julia, it can be used to explain machine learning algorithms developed and trained in other popular programming languages like Python and R. See below for a short introduction and other resources or dive straight into the docs. -
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Tokenize.jl
Tokenization for Julia source code
Tokenize is a Julia package that serves a similar purpose and API as the tokenize module in Python but for Julia. This is to take a string or buffer containing Julia code, perform lexical analysis and return a stream of tokens. -
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Kinetic.jl
Universal modeling and simulation of fluid mechanics upon ML
Kinetic is a computational fluid dynamics toolbox written in Julia. It aims to furnish efficient modeling and simulation methodologies for fluid dynamics, augmented by the power of machine learning. Based on differentiable programming, mechanical and neural network models are fused and solved in a unified framework. Simultaneous 1-3 dimensional numerical simulations can be performed on CPUs and GPUs. -
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Circuitscape.jl
Algorithms from circuit theory to predict connectivity
Circuitscape is an open-source program that uses circuit theory to model connectivity in heterogeneous landscapes. Its most common applications include modeling the movement and gene flow of plants and animals, as well as identifying areas important for connectivity conservation. The new Circuitscape is built entirely in the Julia language, a new programming language for technical computing. Julia is built from the ground up to be fast. As such, this offers a number of advantages over the... -
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Sundials.jl
Julia interface to Sundials, including a nonlinear solver
This is a suite for numerically solving differential equations written in Julia and available for use in Julia, Python, and R. The purpose of this package is to supply efficient Julia implementations of solvers for various differential equations. -
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FiniteDifferences.jl
High accuracy derivatives, estimated via numerical finite differences
FiniteDifferences.jl estimates derivatives with finite differences. See also the Python package FDM. FiniteDiff.jl and FiniteDifferences.jl are similar libraries: both calculate approximate derivatives numerically. You should definitely use one or the other, rather than the legacy Calculus.jl finite differencing, or reimplementing it yourself. At some point in the future, they might merge, or one might depend on the other. -
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Graphs.jl
An optimized graphs package for the Julia programming language
The goal of Graphs.jl is to offer a performant platform for network and graph analysis in Julia, following the example of libraries such as NetworkX in Python. Offers a set of simple, concrete graph implementations – SimpleGraph (for undirected graphs) and SimpleDiGraph (for directed graphs), an API for the development of more sophisticated graph implementations under the AbstractGraph type, and a large collection of graph algorithms with the same requirements as this API. -
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GoldenCheetah
Performance Software for Cyclists, Runners, Triathletes and Coaches
Analyze using summary metrics like BikeStress, TRIMP, or RPE. Extract insight via models like Critical Power and W'bal. Track and predict performance using models like Banister and PMC. Optimize aerodynamics using Virtual Elevation. Train indoors with ANT and BTLE trainers. Upload and Download with many cloud services including Strava, Withings, and Today's Plan. Import and export data to and from a wide range of bike computers and file formats. Track body measures, and equipment use and set... -
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gramm
Gramm is a complete data visualization toolbox for Matlab
... for GRAMmar of graphics for MATLAB. A similar library called Seaborn also exists for Python. Gramm has been used in many publications from varied fields and is particularily suited for neuroscience, from human movement psychophysics (Morel et al. 2017), to electrophysiology (Morel et al. 2016; Ferrea et al. 2017), human functional imaging (Wan et al. 2017) and animal training (Berger et al. 2017). -
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JDF.jl
Julia DataFrames serialization format
... is called a JDF "file". JDF.jl is a pure-Julia solution and there are a lot of ways to do nifty things like compression and encapsulating the underlying struture of the arrays that's hard to do in R and Python. E.g. Python's numpy arrays are C objects, but all the vector types used in JDF are Julia data types. -
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InteractiveViz.jl
Interactive visualization tools for Julia
.... To render perceptually accurate summaries at large scale, allowing drill down to individual data points. To allow generation of data points on demand through a graphics pipeline, requiring computation only at a level of detail appropriate for display at the viewing resolution. Additional data points can be generated on demand when zooming or panning. This package was partly inspired by the excellent Datashader package available in the Python ecosystem. -
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NBInclude.jl
import code from IJulia Jupyter notebooks into Julia programs
NBInclude is a package for the Julia language that allows you to include and execute IJulia (Julia-language Jupyter) notebook files just as you would include an ordinary Julia file. The goal of this package is to make notebook files just as easy to incorporate into Julia programs as ordinary Julia (.jl) files, giving you the advantages of a notebook (integrated code, formatted text, equations, graphics, and other results) while retaining the modularity and re-usability of .jl files. -
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Bayesian Julia
Bayesian Statistics using Julia and Turing
Bayesian statistics is an approach to inferential statistics based on Bayes' theorem, where available knowledge about parameters in a statistical model is updated with the information in observed data. The background knowledge is expressed as a prior distribution and combined with observational data in the form of a likelihood function to determine the posterior distribution. The posterior can also be used for making predictions about future events. Bayesian statistics is a departure from... -
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CxxWrap
Package to make C++ libraries available in Julia
This package aims to provide a Boost. Python-like wrapping for C++ types and functions to Julia. The idea is to write the code for the Julia wrapper in C++, and then use a one-liner on the Julia side to make the wrapped C++ library available there. The mechanism behind this package is that functions and types are registered in C++ code that is compiled into a dynamic library. This dynamic library is then loaded into Julia, where the Julia part of this package uses the data provided through a C... -
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OpenCL.jl
OpenCL Julia bindings
Julia interface for the OpenCL parallel computation API. This package aims to be a complete solution for OpenCL programming in Julia, similar in scope to PyOpenCL for Python. It provides a high level API for OpenCL to make programing hardware accelerators, such as GPUs, FPGAs, and DSPs, as well as multicore CPUs much less onerous. -
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Bloxs
Build dashboards in Jupyter Notebook with numeric and chart boxes
Bloxs is a simple Python package that helps you display information in an attractive way (formed in blocks). Perfect for building dashboards, reports and apps in the notebook. -
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Spark.jl
Julia binding for Apache Spark
A Julia interface to Apache Spark. Spark.jl provides an interface to Apache Spark™ platform, including SQL / DataFrame and Structured Streaming. It closely follows the PySpark API, making it easy to translate existing Python code to Julia. Spark.jl supports multiple cluster types (in client mode), and can be considered as an analog to PySpark or RSpark within the Julia ecosystem. It supports running within on-premise installations, as well as hosted instances such as Amazon EMR and Azure... -
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... environments (shell scripts, Python, R, ...). Please provide the following reference in your work if you are using SAGA: Conrad, O., Bechtel, B., Bock, M., Dietrich, H., Fischer, E., Gerlitz, L., Wehberg, J., Wichmann, V., and Boehner, J. (2015): System for Automated Geoscientific Analyses (SAGA) v. 2.1.4. Geosci. Model Dev., 8, 1991-2007, https://doi.org/10.5194/gmd-8-1991-2015. For more information visit the project homepage and the wiki.
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Gwyddion
Scanning probe microscopy data visualisation and analysis
A data visualization and processing tool for scanning probe microscopy (SPM, i.e. AFM, STM, MFM, SNOM/NSOM, ...) and profilometry data, useful also for general image and 2D data analysis.