Search Results for "bcftools-windows" - Page 10
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Showing 2584 open source projects for "bcftools-windows"
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SuiteSparseGraphBLAS.jl
Sparse, General Linear Algebra for Graphs
A fast, general sparse linear algebra and graph computation package, based on SuiteSparse:GraphBLAS. -
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SciML Style Guide for Julia
A style guide for stylish Julia developers
The SciML Style Guide is a style guide for the Julia programming language. It is used by the SciML Open Source Scientific Machine Learning Organization. As such, it is open to discussion with the community. If the standard for code contributions is that every PR needs to support every possible input type that anyone can think of, the barrier would be too high for newcomers. Instead, the principle is to be as correct as possible to begin with, and grow the generic support over time. All... -
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FFTW.jl
Julia bindings to the FFTW library for fast Fourier transforms
This package provides Julia bindings to the FFTW library for fast Fourier transforms (FFTs), as well as functionality useful for signal processing. These functions were formerly a part of Base Julia. Users with a build of Julia based on Intel's Math Kernel Library (MKL) can use MKL for FFTs by setting a preference in their top-level project by either using the FFTW.set_provider!() method, or by directly setting the preference using Preferences.jl. Note that this choice will be recorded for... -
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Gridap.jl
Grid-based approximation of partial differential equations in Julia
Gridap provides a set of tools for the grid-based approximation of partial differential equations (PDEs) written in the Julia programming language. The library currently supports linear and nonlinear PDE systems for scalar and vector fields, single and multi-field problems, conforming and nonconforming finite element (FE) discretizations, on structured and unstructured meshes of simplices and n-cubes. It also provides methods for time integration. Gridap is extensible and modular. One can... -
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ForwardDiff.jl
Forward Mode Automatic Differentiation for Julia
ForwardDiff implements methods to take derivatives, gradients, Jacobians, Hessians, and higher-order derivatives of native Julia functions (or any callable object, really) using forward mode automatic differentiation (AD). While performance can vary depending on the functions you evaluate, the algorithms implemented by ForwardDiff generally outperform non-AD algorithms (such as finite-differencing) in both speed and accuracy. Functions like f which map a vector to a scalar are the best case... -
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prettymaps
A small set of Python functions to draw pretty maps from OpenStreetMap
A Python package to draw maps with customizable styles from OpenStreetMap data. Created using the osmnx, matplotlib, shapely and vsketch packages. -
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FreqTables.jl
Frequency tables in Julia
This package allows computing one- or multi-way frequency tables (a.k.a. contingency or pivot tables) from any type of vector or array. It includes support for CategoricalArray and Tables.jl compliant objects, as well as for weighted counts. -
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ArviZ.jl
Exploratory analysis of Bayesian models with Julia
ArviZ.jl (pronounced "AR-vees") is a Julia package for exploratory analysis of Bayesian models. It includes functions for posterior analysis, model checking, comparison and diagnostics. -
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Parsers.jl
fast parsing machinery for basic types in Julia
A collection of type parsers and utilities for Julia. Installation: at the Julia REPL, import Pkg; Pkg.add("Parsers") Parsers is maintained collectively by the JuliaData collaborators. Responsiveness to pull requests and issues can vary, depending on the availability of key collaborators. -
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TensorCast.jl
It slices, it dices, it splices
This package lets you work with multi-dimensional arrays in index notation, by defining a few macros which translate this to broadcasting, permuting, and reducing operations. -
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NLPModels.jl
Data Structures for Optimization Models
This package provides general guidelines to represent non-linear programming (NLP) problems in Julia and a standardized API to evaluate the functions and their derivatives. The main objective is to be able to rely on that API when designing optimization solvers in Julia. -
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Setfield.jl
Update deeply nested immutable structs
Update deeply nested immutable structs. We plan to maintain Setfield.jl for a long time. We will however not add new features. -
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Chain.jl
A Julia package for piping a value through transformation expressions
A Julia package for piping a value through a series of transformation expressions using a more convenient syntax than Julia's native piping functionality. -
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Nightingale Visualization
An all-in-one observability solution
An all-in-one observability solution that aims to combine the advantages of Prometheus and Grafana. It manages alert rules and visualizes metrics, logs, and traces in a beautiful web UI. -
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ConcurrentSim.jl
Discrete event process oriented simulation framework written in Julia
A discrete event process-oriented simulation framework written in Julia inspired by the Python library SimPy. One of the longest-lived Julia packages (originally under the name SimJulia). -
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Gnuplot.jl
Julia interface to gnuplot
Gnuplot.jl is a simple package able to send both data and commands from Julia to an underlying gnuplot process. Its main purpose it to provide a fast and powerful data visualization framework, using an extremely concise Julia syntax. It also has automatic display of plots in Jupyter, Juno and VS Code. -
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FromFile.jl
Julia enhancement proposal (Julep) for implicit per file module
This package exports a macro @from, which can be used to import objects from files. The hope is that you will never have to write include again. FromFile is a Julia Language package. To install FromFile, please open Julia's interactive session (known as REPL) and press ] key in the REPL to use the package mode. -
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Parameters.jl
Types w/ default field values, keyword constructors, (un-)pack macros
This is a package I use to handle numerical-model parameters, thus the name. However, it should be useful otherwise too. -
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Excalidraw MCP
Fast and streamable Excalidraw MCP App
Excalidraw-MCP is an open-source Model Context Protocol (MCP) application and server that connects the visual power of Excalidraw’s hand-drawn diagram editor with AI-driven workflows, enabling agents like Claude, ChatGPT, VS Code, and other MCP-compatible hosts to generate and manipulate diagrams programmatically. Rather than being just a static whiteboard, Excalidraw-MCP serves diagrams in real time using an MCP backend and streams interactive visual output back to the client, letting AI... -
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QuantumClifford.jl
Clifford circuits, graph states, and other quantum Stabilizer tools
A Julia package for working with quantum stabilizer states and Clifford circuits that act on them. Graphs states are also supported. The package is already very fast for the majority of common operations, but there are still many low-hanging fruits performance-wise. See the detailed suggested readings & references page for background on the various algorithms. -
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SciMLBase.jl
The Base interface of the SciML ecosystem
SciMLBase.jl is the core interface definition of the SciML ecosystem. It is a low-dependency library made to be depended on by the downstream libraries to supply the common interface and allow for the interexchange of mathematical problems. The SciML common interface ties together the numerical solvers of the Julia package ecosystem into a single unified interface. It is designed for maximal efficiency and parallelism, while incorporating essential features for large-scale scientific machine... -
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Parquet.jl
Julia implementation of Parquet columnar file format reader
A parquet file or dataset can be loaded using the read_parquet function. A parquet dataset is a directory with multiple parquet files, each of which is a partition belonging to the dataset. -
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Conda.jl
https://github.com/JuliaPy/Conda.jl
This package allows one to use conda as a cross-platform binary provider for Julia for other Julia packages, especially to install binaries that have complicated dependencies like Python. conda is a package manager that started as the binary package manager for the Anaconda Python distribution, but it also provides arbitrary packages. Instead of the full Anaconda distribution, Conda.jl uses the miniconda Python environment, which only includes conda and its dependencies. -
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GPUArrays
Reusable array functionality for Julia's various GPU backends
Reusable GPU array functionality for Julia's various GPU backends. This package is the counterpart of Julia's AbstractArray interface, but for GPU array types: It provides functionality and tooling to speed-up development of new GPU array types. This package is not intended for end users! Instead, you should use one of the packages that builds on GPUArrays.jl, such as CUDA.jl, oneAPI.jl, AMDGPU.jl, or Metal.jl. -
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PGFPlotsX.jl
Plots in Julia using the PGFPlots LaTeX package
PGFPlotsX is a Julia package to generate publication quality figures using the LaTeX library PGFPlots. It is similar in spirit to the package PGFPlots.jl but it tries to have a very close mapping to the PGFPlots API as well as minimize the number of dependencies. The fact that the syntax is similar to the TeX version means that examples from Stack Overflow and the PGFPlots manual can easily be incorporated in the Julia code.
