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  • 1
    QUAST

    QUAST

    Quality Assessment Tool for Genome Assemblies

    ...QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A comprehensive analysis results in summary tables (in plain text, tab-separated, and LaTeX formats) and colorful plots. The tool also produces web-based reports condensing all information in one easy-to-navigate file. QUAST and its three follow-up papers (MetaQUAST, Icarus, QUAST-LG) papers were published in Bioinformatics; the last paper (WebQUAST) is out in Nucl Acid Research.
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    Downloads: 30 This Week
    Last Update:
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  • 2
    IPyPlot

    IPyPlot

    Fast and efficient plotting of images inside Python Notebooks

    IPyPlot is a small python package offering fast and efficient plotting of images inside Python Notebooks. It's using IPython with HTML for faster, richer and more interactive way of displaying big numbers of images.
    Downloads: 0 This Week
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  • 3
    pyspread

    pyspread

    Python spreadsheet application

    ...Dependencies + Python (>=2.7, <3.0) + numpy (>=1.1.0) + wxPython (>=2.8.10.1, Unicode version required) + matplotlib (>=1.1.1) + pycairo (>=1.8.8) Optional dependencies + python-gnupg (>=0.3.0, for opening own files without approval) + xlrd (>=0.9.2, for loading Excel® files) + xlwt (>=0.9.2, for saving Excel files, pyspread >=v0.3.0 required) + jedi (>=0.8.0, for tab completion and context help in the entry line, pyspread >=v0.3.0 required) + basemap (>=1.0.7, for the weather example pys file)
    Downloads: 0 This Week
    Last Update:
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