Open Source Python Data Visualization Software - Page 7

This is a collection of different little tools written in MATLAB, JAVA, Python. They all have to to do with Imaging & Microscopy for life science research and related topics or problems. Some of them are meant to be used with ImageJ and MicroManager.

Project moved to https://codelv.com/projects/inkcut/ Code move to https://github.com/codelv/inkcut/ Forum moved to https://inkcut.org/

InstaGraph is a Flask application that converts text input or a URL into a visual knowledge graph. It uses an LLM to identify entities, relationships, labels, and node types from the provided content. The generated graph is displayed visually, helping users understand relationships that may be harder to see in plain text. The project includes Graphviz-based visualization logic and supports updating an existing graph through follow-up instructions. It is designed to be simple, colorful, and easy to use rather than a complex enterprise knowledge graph system. It is useful for learners, researchers, writers, and builders who want to experiment with LLM-assisted relationship mapping.

*Project home now moved to Google Code.* Numerical computing and plotting tools for IronPython.

The enhanced Python fork of JILL, Julia Installer for Linux (and every other platform), Light.

"JSBSim Python Bindings" is a Python wrapper around the open source flight dynamics model JSBSim (http://jsbsim.sourceforge.net/). It allows to use most of the JSBSim C++ API from the Python programming language.

Jupytab allows you to explore in Tableau data which is generated dynamically by a Jupyter Notebook. You can thus create Tableau data sources in a very flexible way using all the power of Python. This is achieved by having Tableau access data through a web server created by Jupytab.

A framework for visualization.

Karesansui is an open-source virtualization management application made in Japan. It's smart graphical user interface lowers your management cost, and brings a total management/audit solution for both physical and virtual servers. Full featured RESTful interface allows customizing and integration with other management/billing systems.

Krisk brings Echarts to the Python Data Science Ecosystem, and helpful tools for high-level statistical interactive visualization.

MBDyn_sim_suite is a collection of free pre&post-processing tools and simulation models for the open-source multi-body analysis software MBDyn forming a general purpose simulation environment for structural dynamics with an emphasis on wind turbines.

MCNPydE is a Python library for extracting data from MCNP output file. It requires Python, Matplotlib and Numpy. It is a data reduction tool for MCNP output for ease of results analysis and viewing.

Mainly a browser for medical patients documents. For now, it works for displaying radiology images in DICOM format. It supports Query/Retrieve. Build on Python, wxPython and ZODB.

The Model Interaction Environment for Neuroscience provides tools for development, searching, editing, execution, and visualization of biophysical models, abstract mathematical models, and experimental protocols used in neuroscience research.

A High-Order Multi-Variate Approximation Scheme for Arbitrary Data Sets, C implementation of the method described in http://web.mit.edu/qiqi/www/paper/interpolation.pdf, with Python and Fortran interfaces.

MIVF - Medical Imaging and Visualization Factory, is a framework for medical applications. It supplies a platform, in which image processing and 3D visualization algorithms can be employed as reusable components (functional modules or plugins).

MMdnn is a set of tools to help users inter-operate among different deep learning frameworks. E.g. model conversion and visualization. Convert models between Caffe, Keras, MXNet, Tensorflow, CNTK, PyTorch Onnx and CoreML. MMdnn is a comprehensive and cross-framework tool to convert, visualize and diagnose deep learning (DL) models. The "MM" stands for model management, and "dnn" is the acronym of deep neural network. We implement a universal converter to convert DL models between frameworks, which means you can train a model with one framework and deploy it with another. During the model conversion, we generate some code snippets to simplify later retraining or inference. We provide a model collection to help you find some popular models. We provide a model visualizer to display the network architecture more intuitively. We provide some guidelines to help you deploy DL models to another hardware platform.

MSCViewer is a tool intended for debugging of control flows in concurrent, distributed systems. The tool loads logs generated by various entities in the system and visualize a sequence diagram chart for events and interactions. The diagram is fully interactive: entity can be added/removed from the diagram and shuffled; events can be filtered, searched, highlighted and annotated with comments. MSCViewer features integration with a Python interpreter which allows writing Python scripts interacting with the model. This powerful feature can be used to automate validatation of distributed control flows, integrate with graphing infrastructure, etc.

MVS - Math Visualization System (See description on homepage)

Artificial plants laboratory.

Not a whole lab, just a small bench ! **Feel free to contact me via https://sourceforge.net/sendmessage.php?touser=1865508 if you want to take over this project** Mathbench is intended for the development of short scripts such as those daily used when doing research in applied mathematics and physics. Simple widgets and a strong plugin system make it useful and extensible. ANNOUCEMENT: Mathbench's purpose is still relevant and could also benefit from the latest improvements of the wxPython toolkit. However, for lack of time, it is not actively developped anymore. Feelf you want to take over this project, I'd be happy to let it evolve in other hands. I might ask a few questions on what you intend to do before giving up all control on it though :)

Matlab/Octave to Python conversion facility. The tool will take existing scripts and convert them to Python. Also includes Python bindings to Octave and a small runtime support library. Built on top of Numeric Python extensions.

MatPy is a Python package for numerical linear algebra and plotting with a MatLab-like interface. It currently consists of wrappers around Numeric and Gnuplot packages, but eventually may be implemented directly in C/C++, or as interface to Octave.

The MeVisLab Community project provides add-on modules that extend the functionality of the MeVisLab software. The modules are provided and maintained by the MeVisLab developer community and can be compiled with the public MeVisLab SDK.

MerDAQ is a data acquisition GUI and other tools for collecting and storing time dependent. Originally designed to collect 4 temperature data vs. time and plot one of the temperatures in real time with matplotlib. Ideal for use with Arduino.