Open Source Python Data Visualization Software - Page 2

Python Data Visualization Software

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Browse free open source Python Data Visualization Software and projects below. Use the toggles on the left to filter open source Python Data Visualization Software by OS, license, language, programming language, and project status.

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  • 1
    Neuroglancer

    Neuroglancer

    WebGL-based viewer for volumetric data

    Neuroglancer is a WebGL-based visualization tool designed for exploring large-scale volumetric and neuroimaging datasets directly in the browser. It allows users to interactively view arbitrary 2D and 3D cross-sections of volumetric data alongside 3D meshes and skeleton models, enabling precise examination of neural structures and biological imaging results. Its multi-pane interface synchronizes multiple orthogonal views with a central 3D viewport, making it ideal for analyzing complex brain imaging data such as connectomics datasets. Neuroglancer operates entirely client-side, fetching data over HTTP in a variety of supported formats including Neuroglancer precomputed, N5, Zarr, and NIfTI, among others. The viewer is built with a multi-threaded architecture, separating rendering and data processing to ensure smooth performance even with massive datasets. Extensively used in neuroscience research, Neuroglancer supports integration with tools.
    Downloads: 2 This Week
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  • 2
    Visdom

    Visdom

    A tool for creating, organizing, and sharing data visualizations

    A flexible tool for creating, organizing, and sharing visualizations of live, rich data. Supports Torch and Numpy. Visdom aims to facilitate visualization of (remote) data with an emphasis on supporting scientific experimentation. Broadcast visualizations of plots, images, and text for yourself and your collaborators. Organize your visualization space programmatically or through the UI to create dashboards for live data, inspect results of experiments, or debug experimental code. Visdom has a simple set of features that can be composed for various use-cases. The UI begins as a blank slate, you can populate it with plots, images, and text. These appear in windows that you can drag, drop, resize, and destroy. The windows live in envs and the state of envs is stored across sessions. You can download the content of windows, including your plots in svg.
    Downloads: 2 This Week
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  • 3
    PyMOL Molecular Graphics System

    PyMOL Molecular Graphics System

    PyMOL is an OpenGL based molecular visualization system

    The Open-Source PyMOL repository has been moved to github: https://github.com/schrodinger/pymol-open-source We still use the pymol-users mailing list here on sourceforge. Please subscribe for community support: https://pymol.org/maillist (Note: SourceForge email newsletter and special offers are optional and can be unchecked) The PyMOL community wiki has its own home: https://pymolwiki.org/
    Downloads: 46 This Week
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  • 4
    QtiPlot
    QtiPlot is a user-friendly, platform independent data analysis and visualization application similar to the non-free Windows program Origin.
    Downloads: 35 This Week
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  • 5
    QUAST

    QUAST

    Quality Assessment Tool for Genome Assemblies

    QUAST performs fast and convenient quality evaluation and comparison of genome assemblies. It is maintained by the Gurevich lab at HIPS (https://helmholtz-hips.de/en/hmsb). For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A comprehensive analysis results in summary tables (in plain text, tab-separated, and LaTeX formats) and colorful plots. The tool also produces web-based reports condensing all information in one easy-to-navigate file. QUAST and its three follow-up papers (MetaQUAST, Icarus, QUAST-LG) papers were published in Bioinformatics; the last paper (WebQUAST) is out in Nucl Acid Research.
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    Downloads: 29 This Week
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  • 6
    XCSoar

    XCSoar

    ... the open-source glide computer

    XCSoar is a tactical glide computer for Android, Linux, macOS, and Windows.
    Downloads: 7 This Week
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  • 7
    Every Door

    Every Door

    A dedicated app for collecting thousands of POI for OpenStreetMap

    The best OpenStreetMap editor for POIs and entrances. The best app for on-the-ground surveying for OpenStreetMap! Add shops and amenities, survey benches and trees, collect addresses, or use them as walking papers. This editor does not make you think. Just go to a mall, and start Every Door. You'll see mapped shops around you: tap on the checkmark for any that are still there, and add shops that are not on the map. That's the entire process: you can keep your entire town up-to-date thanks to this simple editor. There is also a micromapping mode for verifying and adding benches and street lamps. And an entrance mode for adding building attributes and entrances, which are merged automatically into building contours.
    Downloads: 1 This Week
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  • 8
    atpbar

    atpbar

    Progress bars for threading and multiprocessing tasks on terminal

    Progress bars for threading and multiprocessing tasks on the terminal and Jupyter Notebook. atpbar can display multiple progress bars simultaneously growing to show the progresses of iterations of loops in threading or multiprocessing tasks. atpbar can display progress bars on the terminal and Jupyter Notebook. atpbar can be used with Mantichora. atpbar started its development in 2015 as part of Alphatwirl. atpbar prevented physicists from terminating their running analysis codes, which would take many hours to complete, by showing progress bars indicating their codes were actually running. The progress bars have saved the physicists countless hours in total. atpbar had been the sub-package progress of alphatwirl until it became an independent package, with the name atpbar, in February 2019.
    Downloads: 1 This Week
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  • 9
    electricityMap

    electricityMap

    A real-time visualisation of the CO2 emissions of electricity

    Real-time visualization of the Greenhouse Gas (in terms of CO2 equivalent) footprint of electricity consumption built with d3.js and mapbox GL. Real-time data is defined as a data source with an hourly (or better) frequency, delayed by less than 2hrs. It should provide a breakdown by generation type. Often fossil fuel generation (coal/gas/oil) is combined under a single heading like 'thermal' or 'conventional', this is not a problem. Citizens should not be responsible for the emissions associated with all the products they export, but only for what they consume. Consumption-based accounting (CBA) is a very important aspect of climate policy and allows assigning responsibility to consumers instead of producers. Furthermore, this method is robust to governments relocating dirty production to neighboring countries in order to green their image while still importing from it.
    Downloads: 1 This Week
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  • 10
    leafmap

    leafmap

    A Python package for interactive mapping and geospatial analysis

    A Python package for geospatial analysis and interactive mapping in a Jupyter environment. Leafmap is a Python package for interactive mapping and geospatial analysis with minimal coding in a Jupyter environment. It is a spin-off project of the geemap Python package, which was designed specifically to work with Google Earth Engine (GEE). However, not everyone in the geospatial community has access to the GEE cloud computing platform. Leafmap is designed to fill this gap for non-GEE users. It is a free and open-source Python package that enables users to analyze and visualize geospatial data with minimal coding in a Jupyter environment, such as Google Colab, Jupyter Notebook, and JupyterLab. Leafmap is built upon several open-source packages, such as folium and ipyleaflet (for creating interactive maps), WhiteboxTools and whiteboxgui (for analyzing geospatial data), and ipywidgets (for designing interactive graphical user interface [GUI]).
    Downloads: 1 This Week
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  • 11
    pydna

    pydna

    Clone with Python! Data structures for double stranded DNA

    Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning. Planning genetic constructs with many parts and assembly steps, such as recombinant metabolic pathways, are often difficult to properly document as is evident from the poor state of documentation in the scientific literature. The pydna python package provide a human-readable formal description of cloning and genetic assembly strategies in Python which allow for simulation and verification. Pydna can be used as executable documentation for cloning.
    Downloads: 1 This Week
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  • 12
    This is a sophisticated & integrated simulation and analysis environment for dynamical systems models of physical systems (ODEs, DAEs, maps, and hybrid systems). It supports symbolic math, optimization, continuation, data analysis, biological apps...
    Downloads: 6 This Week
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  • 13
    Make sure to download from the link below and not the big giant button. I'm not sure how to fix that, so if you know!
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    Downloads: 23 This Week
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  • 14
    PanelCheck is an easy-to-use software tool for visualization of sensory profiling data using different types of plots. The joint information from the implemented plots provide detailed insight into assessor and panel performance.
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    Downloads: 21 This Week
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  • 15
    TinkerCell is a software for synthetic biology. The visual interface allows users to design networks using various biological "parts". Models can include modules and multiple cells. Users can program new functions using C or Python. www.tinkercell.
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    Downloads: 12 This Week
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  • 16
    GDL - GNU Data Language, a free IDL (Interactive Data Language, see http://ittvis.com/idl/) compatible incremental compiler.
    Downloads: 5 This Week
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  • 17
    RPy (R from Python)
    RPy is a very simple, yet robust, Python interface to the R Programming Language. It can manage all kinds of R objects and can execute arbitrary R functions (including the graphic functions).
    Downloads: 4 This Week
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  • 18
    GEOMS2

    GEOMS2

    Geostatistics and geosciences modeling software

    GEOMS2 is a geostatistics and geosciences modeling software. Provides interface for grid (mesh), point, surface and data (non-spatial) objects. It has a 3D viewer and 2D plots using the well known Python engines Mayavi and Matplotlib. It has several functions to manipulate your data as well as provide univariate and multivariate analysis. NOTE: The software is still an early beta. Please tell us if you found a bug. Download datasets for students of Geostatistics 2017 (Petroleum Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Petroleum.zip/download Download datasets for students of Geostatistics 2017 (Geology and Mining Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Mining.zip/download Old: http://sourceforge.net/projects/geoms2/files/SETS_geoestatistica2_2015.7z/download https://sites.google.com/site/cmrpsoftware/downloads/Quarry_sets.7z?attredirects=0&d=1 http://sourceforge.net/projects/geoms2/files/Mining.7z/download
    Downloads: 18 This Week
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  • 19
    Mantid
    Mantid Project (www.mantidproject.org)
    Downloads: 17 This Week
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  • 20
    UPDATE: Chromium is no longer updated or maintained. The project is frozen. Chromium is a flexible framework for scalable real-time rendering on clusters of workstations, derived from the Stanford WireGL project code base.
    Downloads: 3 This Week
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  • 21
    WxGeometrie

    WxGeometrie

    Le couteau-suisse du prof de maths

    Calculatrice graphique en français, destinée aux professeurs ou aux étudiants du collège et du lycée. Elle permet de faire du calcul formel, de tracer des courbes et des figures géométriques exportables en png, eps ou svg. Linux, Windows... Cette version n'est plus maintenue. Nous vous recommandons d'utiliser désormais la nouvelle version, nommée Géophar : http://sourceforge.net/projects/geophar
    Downloads: 5 This Week
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  • 22
    SMILI

    SMILI

    Scientific Visualisation Made Easy

    The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with graphical user interfaces and/or via the command-line. See our YouTube channel for tutorial videos via the homepage. The applications are all built out of a uniform user-interface framework that provides a very high level (Qt) interface to powerful image processing and scientific visualisation algorithms from the Insight Toolkit (ITK) and Visualisation Toolkit (VTK). The framework allows one to build stand-alone medical imaging applications quickly and easily.
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    Downloads: 11 This Week
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  • 23
    MicroView
    MicroView is a 2D/3D image viewer and analysis tool. It is written in Python and uses VTK for all of its graphical capabilities.
    Downloads: 9 This Week
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  • 24
    A windrose, also know as polar rose plot, is a special diagram for representing the distribution of meteorological datas, typically wind speeds by class and direction.
    Downloads: 4 This Week
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  • 25
    SBEVSL is a collaborative project between Dowling and RIT on the development of a Structural Biology Extensible Visualization Scripting Language, so that users can move freely among various molecular graphics tools, such as rasmol, pymol, raster3d, etc.
    Downloads: 2 This Week
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