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Mind map architect program is good tool for brainstorming for single person just as for team. Mind mapping tools can be usable for todo lists, notes, or work planning.

InterferenceSimulator is a program demonstrating quantal two-slit Fresnel interference patterns with one, the other, or both slits open. A magnetic flux situated between the two slits allows demonstration of the Aharonov–Bohm effect. Simulations with short de Broglie wavelengths illustrate the classical limit of quantum mechanics. Because of the universality of wave phenomena, this program can also demonstrate the geometrical-optics limit of wave optics for small wavelengths.

ProgPorts is an administrative and easy user interface to hundreds of proteomics, molecular dynamics, and protein crystallography programs. It is a hybrid of the prog/setup system, developed at Johns Hopkins University, and GNU-Darwin ports system.

ZEE HAS MOVED TO GITHUB (see "Zee Web Site" link).

Meskalin is a *nix parallel port control program it allows you to easily control LED's or wetwire devices like brainwave machines ported for: FreeBSD, netBSD, openBSD and Linux

A tool suite to analyse protocol streams and whose flow characteristic. On the other side, the tool suite can be used to gather information about the network infrastructure and detect bottlenecks.

Cellicone is a project to develop an artificial life organism with the necessary components to make it comparable to biological life as we know it. This includes components ranging from proteins to cells to organs to limbs, and many steps between.