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Stan.jl illustrates the usage of the 'single method' packages
A collection of example Stan Language programs demonstrating all methods available in Stan's cmdstan executable (as an external program) from Julia. For most applications one of the "single method" packages, e.g. StanSample.jl, StanDiagnose.jl, etc., is a better choice for day-to-day use. To execute the most important method in Stan ("sample"), use StanSample.jl. Some Pluto notebook examples can be found in the repository.
This package allows one to use conda as a cross-platform binary provider for Julia for other Julia packages, especially to install binaries that have complicated dependencies like Python. conda is a package manager that started as the binary package manager for the Anaconda Python distribution, but it also provides arbitrary packages. Instead of the full Anaconda distribution, Conda.jl uses the miniconda Python environment, which only includes conda and its dependencies.
Tulip is an open-source interior-point solver for linear optimization, written in pure Julia. It implements the homogeneous primal-dual interior-point algorithm with multiple centrality corrections and therefore handles unbounded and infeasible problems. Tulip’s main feature is that its algorithmic framework is disentangled from linear algebra implementations. This allows to seamless integration of specialized routines for structured problems.
Matplot++: A C++ Graphics Library for Data Visualization
Data visualization can help programmers and scientists identify trends in their data and efficiently communicate these results with their peers. Modern C++ is being used for a variety of scientific applications, and this environment can benefit considerably from graphics libraries that attend the typical design goals toward scientific data visualization. Besides the option of exporting results to other environments, the customary alternatives in C++ are either non-dedicated libraries that...
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Clone with Python! Data structures for double stranded DNA
...The pydna python package provide a human-readable formal description of cloning and genetic assembly strategies in Python which allow for simulation and verification. Pydna can be used as executable documentation for cloning.