Open Source Mac Data Visualization Software - Page 17

A 3D graphical interface for building, simulating and optimizing Markov kinetic models in response to user defined time dependent stimuli. Models can be represented as either states and connecting transitions or interacting allosteric elements (see http://dx.doi.org/10.1085/jgp.201411183). Model parameters can be optimized by fitting model responses to user data. Optional user defined constraint equations for model parameters are parsed with EigenLab (https://github.com/marcel-goldschen-ohm/EigenLab). Convenient simulation and summarization across 2-dimensional sets of stimulus conditions makes constructing stimulus-response curves incredibly simple. For ion channels, this is useful for simulating dose-response or current-voltage curves both with and without a secondary stimulus (e.g. some drug). A series of video tutorials are available at https://www.youtube.com/watch?v=7I2XPkdOvCg&list=PL-J_lULjiFsCPL2pkz8_tFe_aJ4Fc8a8k&index=1.

MicroArray Genome Imaging and Clustering Tool (MAGIC tool) is a platform-independant java program for analyzing MicroArray data (.tiff scans & .txt godlists) via graphs and clustering operations (including QT-clustering). http://www.bio.davidson.edu/magic

A collection of JavaBeans for charting, backed by the popular JFreeChart library.

Java-based scientific graphics with support for Java, Groovy, MATLAB, Python, the R statistical environment, Scala and SciLab.

Cca-forum unifies the Common Component Architecture tools and tutorial. It includes the CCA specifications, the Ccaffeine framework for HPC, and related tools. These support multilanguage scientific and parallel computing.

ccplot is an open source command-line program for plotting profile, layer and earth view data sets from CloudSat, CALIPSO and Aqua MODIS products.

geoStarsLib has functions for dealing with many geodesy-based problems found in positioning, pointing, and surveying situations. It is useful to determine absolute position on the earth, pointing vectors, coordinate transformations, and other functions.

GLOOP is Liquid Object Oriented Particles. libGLOOP render implicit surfaces from a set of "meta-points". Uses include: modeling liquids, volume rendering, computerized silly putty. Based on code by Brian Sharp

SADSA (Software Application for Data Science and Analytics) is a Python-based desktop application designed to simplify statistical analysis, machine learning, and data visualization for students, researchers, and data professionals. Built using Python for the GUI, SADSA provides a menu-driven interface for handling datasets, applying transformations, running advanced statistical tests, machine learning algorithms, and generating insightful plots — all without writing code.

Simulates a city grid of streets, intersections and traffic signals. It supports 8 phases with overlaps, right and left hand drive, turnouts, permitted left and right on red, density and semi-actuation and help screens for every panel.

Arcadia is a light-weight, cross-platform, C++ desktop application designed for visualizing biological networks such as metabolic pathways.

This project aims at visualizing what a picture of a star will look like, depending on telescope, seeing conditions, settings of your astro camera etc. It simulates taking exposures of stars over a range of magnitudes and stacks them.

BuddySpace is an enhanced Jabber client providing secure presence management, web services and instant messaging. It extends the 'buddy list' concept with enhanced and customisable visualisation of presence (incl. maps, logical layouts).

Calculation of camshafts - allows to define a camshaft profile on the set trajectory which should provide the given mechanism. The trajectory can be set graphically, co-ordinates or function.

Charmol is a cross-platform GUI/command-line based program for making high-quality pictures of molecular structures, nowadays working on Linux, MacOS and Windows. As output, it produces POV-Ray rendered images or files in VRML format. Charmol is capable of making pictures containing: - from small- to large-size molecules - more molecules together (different settings possible) - orbitals using molden and fchk files (GTO functions up to 'h' angular momentum supported) - surfaces using gaussian cube files (also color-mapped surfaces according to potential) - schematic representation of vibrations using arrows - user-defined arrows representing vectorial properties - measuring gauges - combinations of these features (more orbitals together, orbitals and arrows together etc.) Charmol allows for fine tuning of the final molecular design.

Chryzodus is a chryzode renderer using Allegro graphics library. Chryzodes are mathematically rendered images which are graphical representations of mathematical operations and relations between numbers. This is a proof maths can be incredibly beautiful !

clusterviz allows to cluster three-dimensional data. The clustering process is visualized using OpenGL. As clustering algorithms the family of k-means algorithms is implemented, including mixture models.

CSF-Crowd Simulation Framework A Massive Crowd Simulation is a computer simulation of a crowd of agents. Agents are digital characters with a certain artificial intelligence. The individual agents can act on their own, they don't need to be pre-prog

A java based digital logic simulator, designed to be used as an educational tool. uses a GUI to allow users to quickly and easily create and visualise circuits from simple components. User can create custom components

NOTE: New versions will no longer be uploaded to SourceForge - for the latest versions please visit https://github.com/KerryL/DataPlotter/releases/latest.

Extracts dependencies and OO metrics from Java class files produced by most Java compilers. Computes API differences between versions. No source needed. Includes both Swing and command-line interfaces, with XSL stylesheets for formatting output.

... visualizes EBNF (Extended Backus Naur Form). Therefore an .ebnf File is required, which contains rules written in EBNF. The program parses the rules, visualizes them as syntax diagrams and is able to generate .gif and .emf files for further use.

Diagram (JGraph) driven simulator. Bondgraphs > nonlinear differantial system > plot: implemented for economics and ecology. Network analysis: emergy propagation implemented. Would also fit for electronics, mechanics, cost, GWP, footprint analysis.

EpsGraphics is a Java library to output EPS graphics. EpsGraphics is an extension of Graphics2D that allows you to draw to an EPS file as it was a Java graphics object. CMYK as well as RGB color models are supported.

java3d-eclipse project defines a set of plug-ins for building java3d enabled applications.