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Cytoscape is a software platform for computational biology and
bioinformatics, useful for integrating data, and for visualizing and
performing calculations on molecular interaction networks
Sled stands for SLice EDitor. It aims to be the ultimate tool for viewing and editing 3D volume datasets. Those working in the field of volume visualization will appreciate this tool a lot!
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FileConv is a set of utility classes that allow java programmers to load/write 3d files of various formats to/from 3d applications and convert between various file formats so that people using different 3d applications can collaborate on the same project
Xi3D is an X3D renderer and browser for 3D Web content. It contains compliant parsers for VRML'97 types, a java scenegraph, XML bindings using SAX2, a content converter, full runtime and event model, DOM Level 2, vecmath
Real-time data visualization. Graphically view your data as it's being generated. Peakster is a very intuitive GUI written entirely in Python, which monitors data at regular intervals and uses gnuplot to render 2D, 3D and superimposed plots.
NovaGrid is a light spreadsheet made with Python / Tkinter, based on Tktable. The objective of this project is to have a light spreasheet python object which can be used into larger projects.
The code is totaly written in Python (actualy 2.2.2).
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TerraVision is a real-time multi-threaded 3D terrain visualization system. It can browse massive terrain and other data sets that are streamed over the Web. It also supports overlaying rich 3D models on the terrain to represent buildings, icons, etc.
TouchGraph provides a set of interfaces for graph visualization using force-based layout and focus+context techniques. For now only older code is available, but we are planning to release new versions as well.
RmscopII is a Tcl/Tk script responsible to redirect protein structure files (PDB files) or RasMol scripts to multiple RasMol sessions. It can be used as a web browser helper application or as a standalone program.
A simulation of balls bouncing in a room in n >= 2 dimensions for educational purpose or usable as screensaver. Runs under UNIX/Linux, needs the Qt GUI Library and OpenGL.
SImg is astronomical image processing software for Linux. Some of the features are deconvolution (various algorithms), removing interferences, automatic shifting of images, computation of PSF and and a visualization tool.
Rapid Visual OAI Tool (RVOT) can be used to graphically construct a OAI-PMH repository from a collection of files. The records in the original collection can be in any one of the acceptable format. The format currently supported are RFC1807,Marc,COSATI
tkCybernetics is a small grafical tool for rapidly setting up simulations of simple cybernetic systems. It was designed for didactic purpose but might be useful for the quick test of some circuit too.
MAED is a simple but powerfull math program with educational character.
It has a Lisp like programming language, a nice GUI. It can work in client-server mode.
A main goal is to make a program which can solve math problems using both numerical and symb
The Chassis library is a fast class-based library designed to ease the pain of multiplatform application development, with a strong emphasis on openGL games.
JOpenChart is an open source Java library and toolkit for creating different kinds of charts and embedding them into web applications or Swing applications. It further supports interpolating data and plotting mathematical functions etc. pp.
A Scene-Graph-API based on Aura (see http://aura.sourceforge.net). We are programming in C++ and will support Linux and Win32-Platforms.
Scenes which are in 3DS-format can be imported.
Other modifications include gameprogramming-algorithms.