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APTo is a free and open-source tool to view, explore and analyse 3D Atom Probe data. You can start by simply opening a *.pos file with the corresponding *.rng file.
DemoScript runs commandline-based demos. It logs to a remote host (ssh), writes the password, and then writes the commands specified in a script. The tool mimics someone's typing: delay between each letter and intelligent command sending synchronisation.
This project is the development of a Selection Tool primarely used in ImageJ and possibly in GIMP. It is based in LiveWire and SNAKES methods and will firstly be used in IVUS (intravascular ultra sound) images.
GParticles is a tool to simulate the growth behaviour of two- and three-dimensional nano particles based on a simple grid model, with adjustable (time-dependent) concentrations of the particle's different components.
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ProteinShader is a molecular visualization tool that can produce illustrative renderings of proteins that approximate what an artist might create using pen and ink. This free platform-independent program is written in Java and OpenGL Shading Language.
BINViz(Bidirectional Interactive Network Visualization) is a JavaScript library for network and graph visualization. The goal of this tool is to provide a better way to visualize complex graphical models and the underlying data in a web-based environ
Manage multiple connections to the OpenDX executive. This allows gateway programs like apache/php or apache/python to create dynamic content for web pages based on visualizations created using the OpenDX tool.
The ATLAS Multimedia Educational Lab for Interactive Analysis (AMELIA) is an educational tool for High-Energy physics featuring the ATLAS detector at CERN. Using the Irrlicht engine AMELIA integrates event analysis and contextual media in a 3D interface.
Draw 2D: function chart, data points chart, statistical bar chart. It's possible to combine all 3 types of chart into one. This is powerfull and easy tool, as it gives ability to manage many charts parameters. This may often compete with Gnuplot and oth
The SESAME (Simulation of Embedded System Architectures for Multilevel Exploration) software system is an embedded system co-simulation environment and research tool which implements the ideas of the SESAME project at the University of Amsterdam.
GrALoG is a tool for editing and visualising graph-like-structures and the results of algorithms running on them. Through it's plugins GrALoG is hugely extendable, i.e. plugin-developers can define their own graph-like structures and algorithms.
JRET (Java Reverse-Engineering Tool) is a program that is capable of reconstructing sequence diagrams from JUnit testsuites through dynamic analysis. It is written in Java/AspectJ and provides a GUI as well as command-line possibilities.
MZ-Analyzer is a tool for visualization and analysing of multiple mass spectrometry data in 2D and 3D mode, including the function of quantitating the LC-peak of the specified identified peptides.
LAMINA (Leaf shApe deterMINAtion) is a tool to provide classical measures of leaf shape (blade dimensions) and size (area) as well as measures that indicate asymmetry in leaf shape and measures of herbivory damage (missing leaf area).
A multithread tool to assist pre-surgical evaluation of intractable epilepsy patients. The tool implements a volumetric visualization technique and an interactive manipulation interface.
Geneview is a visualisation tool to display genetic sequence data stored in nucleic sequence databases like <A HREF="http://www.ncbi.nlm.nih.gov/Genbank/">GenBank</A>.
GerViz is an open-source visualization tool for internet and business user. Basically GerViz is for graphically representing the relation network of companies from the Deutschland AG.
PatXi is a lisp tool for plotting histograms, scatter-plots and function plots. Cl-cbr is a cbr viewer for linux. It runs over cmucl,using ltk. Nix.Math is a package to do numerical calculus in Pike
It provides a graphical animated representation of a network simulation run (e.g. for ns-2). Further, common metrics are calculated and displayed. The tool is written in Java and supplies 2 frontends (applet and stand-alone application).
Open-source Cube Files Manipulator Program (OpenCubMan)is a tool for computational chemists interested in performing operations on files with volumetric data representing wavefunctions or electron densities (often called cube files).
avoCADo is a 3D design and modeling program (CAD) which aims to be a collaborative tool with an intuitive user interface for both engineers and artists alike. avoCADo is open source under the GPL.
eXtace is a 3D audio visualization tool (or eye candy depending on how you look at it). eXtace requires ESD (Esound) for its sound input source. It performs a FFT (fast fourier transform) on audio and displays it via various graphical modes.