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Showing 53 open source projects for "linux programming"
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Circuitscape.jl
Algorithms from circuit theory to predict connectivity
Circuitscape is an open-source program that uses circuit theory to model connectivity in heterogeneous landscapes. Its most common applications include modeling the movement and gene flow of plants and animals, as well as identifying areas important for connectivity conservation. The new Circuitscape is built entirely in the Julia language, a new programming language for technical computing. Julia is built from the ground up to be fast. As such, this offers a number of advantages over the... -
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CounterfactualExplanations.jl
A package for Counterfactual Explanations and Algorithmic Recourse
CounterfactualExplanations.jl is a package for generating Counterfactual Explanations (CE) and Algorithmic Recourse (AR) for black-box algorithms. Both CE and AR are related tools for explainable artificial intelligence (XAI). While the package is written purely in Julia, it can be used to explain machine learning algorithms developed and trained in other popular programming languages like Python and R. See below for a short introduction and other resources or dive straight into the docs. -
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CSV
Utility library for working with CSV and other delimited files
Welcome to CSV.jl! A pure-Julia package for handling delimited text data, be it comma-delimited (csv), tab-delimited (tsv), or otherwise. A fast, flexible delimited file reader/writer for Julia. -
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Graphs.jl
An optimized graphs package for the Julia programming language
The goal of Graphs.jl is to offer a performant platform for network and graph analysis in Julia, following the example of libraries such as NetworkX in Python. Offers a set of simple, concrete graph implementations – SimpleGraph (for undirected graphs) and SimpleDiGraph (for directed graphs), an API for the development of more sophisticated graph implementations under the AbstractGraph type, and a large collection of graph algorithms with the same requirements as this API. -
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Makie
Interactive data visualizations and plotting in Julia
Makie is an interactive data visualization and plotting ecosystem for the Julia programming language, available on Windows, Linux, and Mac. The backend packages GLMakie, WGLMakie, CairoMakie and RPRMakie add different functionalities: You can use Makie to interactively explore your data and create simple GUIs in native Windows or web browsers, export high-quality vector graphics or even raytrace with physically accurate lighting. -
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Gridap.jl
Grid-based approximation of partial differential equations in Julia
Gridap provides a set of tools for the grid-based approximation of partial differential equations (PDEs) written in the Julia programming language. The library currently supports linear and nonlinear PDE systems for scalar and vector fields, single and multi-field problems, conforming and nonconforming finite element (FE) discretizations, on structured and unstructured meshes of simplices and n-cubes. It also provides methods for time integration. Gridap is extensible and modular. One can... -
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Measurements.jl
Error propagation calculator and library for physical measurements
Error propagation calculator and library for physical measurements. It supports real and complex numbers with uncertainty, arbitrary precision calculations, operations with arrays, and numerical integration. Physical measures are typically reported with an error, a quantification of the uncertainty of the accuracy of the measurement. Whenever you perform mathematical operations involving these quantities you have also to propagate the uncertainty, so that the resulting number will also have... -
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SciML Style Guide for Julia
A style guide for stylish Julia developers
The SciML Style Guide is a style guide for the Julia programming language. It is used by the SciML Open Source Scientific Machine Learning Organization. As such, it is open to discussion with the community. If the standard for code contributions is that every PR needs to support every possible input type that anyone can think of, the barrier would be too high for newcomers. Instead, the principle is to be as correct as possible to begin with, and grow the generic support over time. All... -
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Pkg Julia
Package manager for the Julia programming language
Unlike traditional package managers, which install and manage a single global set of packages, Pkg is designed around “environments”: independent sets of packages that can be local to an individual project or shared and selected by name. The exact set of packages and versions in an environment is captured in a manifest file which can be checked into a project repository and tracked in version control, significantly improving reproducibility of projects. If you’ve ever tried to run code you... -
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JLD.jl
Saving and loading julia variables while preserving native types
JLD, for which files conventionally have the extension .jld, is a widely used format for data storage with the Julia programming language. JLD is a specific "dialect" of HDF5, a cross-platform, multi-language data storage format most frequently used for scientific data. By comparison with "plain" HDF5, JLD files automatically add attributes and naming conventions to preserve type information for each object. For lossless storage of arbitrary Julia objects, the only other complete solution... -
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Bayesian Julia
Bayesian Statistics using Julia and Turing
Bayesian statistics is an approach to inferential statistics based on Bayes' theorem, where available knowledge about parameters in a statistical model is updated with the information in observed data. The background knowledge is expressed as a prior distribution and combined with observational data in the form of a likelihood function to determine the posterior distribution. The posterior can also be used for making predictions about future events. Bayesian statistics is a departure from... -
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MeasureTheory.jl
"Distributions" that might not add to one.
Probabilistic programming and statistical computing are vibrant areas in the development of the Julia programming language, but the underlying infrastructure dramatically predates recent developments. The goal of MeasureTheory.jl is to provide Julia with the right vocabulary and tools for these tasks. In this package we introduce well-chosen foundational primitives centered around the notion of measure, density and conditional probability with powerful combinators and transforms intended to... -
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Kinetic.jl
Universal modeling and simulation of fluid mechanics upon ML
Kinetic is a computational fluid dynamics toolbox written in Julia. It aims to furnish efficient modeling and simulation methodologies for fluid dynamics, augmented by the power of machine learning. Based on differentiable programming, mechanical and neural network models are fused and solved in a unified framework. Simultaneous 1-3 dimensional numerical simulations can be performed on CPUs and GPUs. -
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ProxSDP.jl
Semidefinite programming optimization solver
ProxSDP is an open-source semidefinite programming (SDP) solver based on the paper "Exploiting Low-Rank Structure in Semidefinite Programming by Approximate Operator Splitting". The main advantage of ProxSDP over other state-of-the-art solvers is the ability to exploit the low-rank structure inherent to several SDP problems. -
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Weave
Scientific reports/literate programming for Julia
Weave is a scientific report generator/literate programming tool for the Julia programming language. It resembles Pweave, knitr, R Markdown, and Sweave. You can write your documentation and code in an input document using Markdown, Noweb or ordinal Julia script syntax, and then use the weave function to execute code and generate an output document while capturing results and figures. Supports various output document formats: HTML, PDF, GitHub markdown, Jupyter Notebook, MultiMarkdown,... -
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ODBC.jl
An ODBC interface for the Julia programming language
The ODBC.jl package provides a Julia interface for the ODBC API as implemented by various ODBC driver managers. More specifically, it provides a prebuilt copy of iODBC and unixODBC for OSX/Linux platforms, while still relying on the system-provided libraries on Windows. This means that no extra installation of a driver manager is necessary after installing the ODBC.jl package. -
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JuliaCall for Seamless Integration of R
Embed Julia in R
Package JuliaCall is an R interface to Julia, which is a high-level, high-performance dynamic programming language for numerical computing. Below is an image for Mandelbrot set. JuliaCall brings more than 100 times speedup of the calculation. -
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Julog.jl
A Julia package for Prolog-style logic programming
A Julia package for Prolog-style logic programming. -
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Soss
Probabilistic programming via source rewriting
Soss is a library for probabilistic programming. Soss and DynamicPPL are both maturing and becoming more complete, so the above will change over time. It's also worth noting that we (the Turing team and I) hope to move toward a natural way of using these systems together to arrive at the best of both. -
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ConstraintSolver.jl
ConstraintSolver in Julia
This package aims to be a constraint solver completely written in Julia. The concepts are more or less fully described on my blog OpenSourc.es. There is of course also the general user manual here which explains how to solve your model. -
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Temporal.jl
Time series implementation for the Julia language
This package provides a flexible & efficient time series class, TS, for the Julia programming language. While still early in development, the overarching goal is for the class to be able to slice & dice data with the rapid prototyping speed of R's xts and Python's pandas packages, while retaining the performance one expects from Julia. See the documentation for a more in-depth look at the package and some of the pain points it may solve when doing technical research with time series data. -
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Chess.jl
Julia chess programming library
A Julia chess programming library. This package contains various utilities for computer chess programming. There are functions for creating and manipulating chess games, chess positions and sets of squares on the board, for reading and writing chess games in the popular PGN format (including support for comments and variations), for creating opening trees, and for interacting with UCI chess engines. The library was designed for the purpose of doing machine learning experiments in computer... -
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LightGraphs
An optimized graphs package for the Julia programming language
LightGraphs offers both (a) a set of simple, concrete graph implementations -- Graph (for undirected graphs) and DiGraph (for directed graphs), and (b) an API for the development of more sophisticated graph implementations under the AbstractGraph type. The project goal is to mirror the functionality of robust network and graph analysis libraries such as NetworkX while being simpler to use and more efficient than existing Julian graph libraries such as Graphs.jl. It is an explicit design... -
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CUDAnative.jl
Julia support for native CUDA programming
The programming support for NVIDIA GPUs in Julia is provided by the CUDA.jl package. It is built on the CUDA toolkit and aims to be as full-featured and offer the same performance as CUDA C. The toolchain is mature, has been under development since 2014, and can easily be installed on any current version of Julia using the integrated package manager. -
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HMMBase.jl
Hidden Markov Models for Julia
HMMBase is not maintained anymore. It will keep being available as a Julia package but we encourage existing and new users to migrate to HiddenMarkovModels.jl which offers a similar interface. For more information see HiddenMarkovModels.jl: when did HMMs get so fast?. HMMBase provides a lightweight and efficient abstraction for hidden Markov models in Julia. Most HMMs libraries only support discrete (e.g. categorical) or Normal distributions. In contrast HMMBase builds upon Distributions.jl...
