Draw vector graphics to scale using a descriptive language
JaxoDraw: Feynman Diagrams made easy!
Toolkit for working with and mapping geospatial data
High-speed, 3D-friendly, TightVNC-compatible remote desktop software
A premier mind-mapping software written in Java
Gephi the open graph Viz platform
Computation and Visualization environment
Particle Image Velocimetry
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
The most popular mindmapping and brainstorming software
Graphics generator for pie diagram matrix from spreadsheets
cy2fluxviz : Cytoscape 2 plugin for flux distribution visualization
PIVOT is a simple yet flexible visualization data tool