Gephi the open graph Viz platform
A premier mind-mapping software written in Java
An interactive viewer for three-dimensional chemical structures.
Toolkit for working with and mapping geospatial data
JaxoDraw: Feynman Diagrams made easy!
High-speed, 3D-friendly, TightVNC-compatible remote desktop software
3D Network Traffic Visualisation
Innovative text document search. http://dynaq.opendfki.de for details.
Syntax Tree Drawing Software (Linguistics)
Penthode simulates, draw and plot electrical power distributions
A documentation and report generator for systems biological models
Maui is the Maltcms User Interface
Free data acquisition and data visualization cross-platform software
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
Java-based scientific graphics
A wildfire decision support system and visualization tool from Emxsys.