Search Results for "Databases Open Source & DevTools"

OrientDB is an Open Source Multi-Model NoSQL DBMS with the support of Native Graphs, Documents, Full-Text search, Reactivity, Geo-Spatial and Object Oriented concepts. It's written in Java and it's amazingly fast. No expensive run-time JOINs, connections are managed as persistent pointers between records. You can traverse thousands of records in no time. Supports schema-less, schema-full and schema-mixed modes. Has a strong security profiling system based on user, roles and predicate...

Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other...

UIBM (= Universal Individual-Based Model) is an agent-based simulation/3d-dvisualization of the dynamics within multispecies plant communities of Northwest Europe, parameterized from databases using universal scaling laws.

The Universal Java Matrix Package (UJMP) is an open source Java library which provides sparse and dense matrix classes, as well as a large number of calculations for linear algebra such as matrix multiplication or matrix inverse. Operations such as mean, correlation, standard deviation, replacement of missing values or the calculation of mutual information are supported, too. The Universal Java Matrix Package provides various visualization methods, import and export filters for a large number of file formats, and even the possibility to link to JDBC databases. ...

Bayesian Network tools in Java (BNJ) is an open-source suite of software tools for research and development using graphical models of probability. It is published by the Kansas State University Laboratory for Knowledge Discovery in Databases (KDD).

DbViz produces plots of data contained in MySQL databases. Data can be viewed by looking at line graphs, xy scatter plots, and bar graphs. This greatly simplifies data analysis.

Interactive visualization and analysis tool for large, multidimensional data sets. NDVis integrates with databases and allows users to create visualizations by writing queries. It uses dimensional stacking, pixelization, and interaction techniques.

Geneview is a visualisation tool to display genetic sequence data stored in nucleic sequence databases like <A HREF="http://www.ncbi.nlm.nih.gov/Genbank/">GenBank</A>.

SPedit is a new curation environment for the Swiss-Prot and TrEMBL databases. For more information about these databases see http://www.expasy.ch/sprot/ and http://www.ebi.ac.uk/swissprot/