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3D viewer which arranges BLAST hits and other bioinformatics-related alignments in a rotating, cylindrical display. Feedback appreciated. NOTE: requires Java3d installation.
Superceded by Cylindrical Alignment App
Appacts was designed and developed with user in mind, leaving old style analytics services behind and starting fresh. We’ve looked for a way to empower our users by presenting data to them in a quick summarised view. We are here to make analytics exciting, engaging and more importantly productive, so you can make right decisions quickly.
...It supports instruments from Agilent, Eco Physics, ICS Electronics, Keithley, Omega, Teledyne and other manufacturers. The script language is XML-based. Syntax highlighting is available. The sourcecode is included in the distribution. Contact the project admin to get SVN access.
...If you are running a non Debian-based Linux, download the zip file and follow the instructions in the README file.
If you have problems, want to contribute your code or have some special needs, let us know and send an email to philipp.eittenberger(Ätt)uni-bamberg.de
(If you want the sourcecode of version 0.2.3 and compile Atheris yourself check it out with svn per:
"svn co https://atheris.svn.sourceforge.net/svnroot/atheris/trunk atheris")
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jSET - Java Software Evolution Tracker is a software visualization tool that allows practitioners to assess the magnitude of changes across the versions of a software system.
This tool provides an interactive visualization of the Wikipedia information space, primarily as a means of navigating the category hierarchy as well as the article network. The project is implemented in Java, utilizing the Java 3D package.
This was a student project in 2004-2005 at the University of Macau. This is the code from April 2005 that was finally uploaded to SourceForge in 2012 for archival purposes and to meet the demand from Wikipedia researchers world-wide.
Intrepid Bioinformatic's Integrative Genomics Viewer (IGV) modifications for viewing NGS files on IGV with data located on remote servers, accessed by web services.
An Open Source portable pure Java game library with example games, Swing-based sprite animation engine, deployment framework, and firewall tunneling networking. The code is documented in the book Advanced Java Game Programming by David Wallace Croft.
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Chisio is a free editing and layout tool for compound or hierarchically structured graphs based on the Eclipse Graph Editing Framework (GEF) that can be customized to build application-specific graph visualization tools by modifying its code-base.
!!! For latest version, please see !!!
http://code.google.com/p/chied
CThruView is an image viewer that allows mouse clicks to go through the image. Use it as tracing paper or splash screen. The image can be made semi-transparent, flipped, rotated, zoomed, always on top, clipped, moved, hidden and centered.
To help math students visualize the prufer code and/or discover anything new about the prufer code not already present. Examples and live applet on webiste.
Pure Java implementation of an interactive 3d graph rendering engine and editor using a spring embedder algorithm. Nice looking sterile real time 3d environment. Feel free to extend our project and build something awesome, just let us know please :D
Sanchay is a collection of tools and APIs for language researchers. It has some implementations of NLP algorithms, some flexible APIs, several user friendly annotation interfaces and Sanchay Query Language for language resources.
Vendetta is used to manage and visualize distributed network testbeds. The monitor application visualizes network events in 3D. Vendetta also simplifies common testbed tasks such as pushing code to nodes, initiating experiments, and retreiving logfiles.
Wow Log Parser is a combat log parser for the game World of Warcraft. The purpose of the program is to parse the files generated with the /combatlog command. The sourcecode can be found on: http://www.gurre.eu/wowlogparser/forum
An extended version of RoboCup Rescue Simulation official viewer intended to make it more informative. It utilizes charts, statistics and some missing little useful features.
ScapeToad is an easy to use application for the cartogram creation. Cartograms are deformed maps where the polygon size is proportional to a given statistical value. ScapeToad reads and writes Shapefiles.
See <https://github.com/christiankaiser/ScapeToad> for the latest version of the code.
This software system serves as both a DICOM image viewer as well as a diagramming tool for collaborating notes on the given image sets. This my Computer Science graduate thesis project at Loyola Marymount University.
Code libraries and media files contributed by Whoola, Inc. Includes Whoola Cyberspace, a virtual reality web browser with fly-through hyperlinks. The sourcecode includes a COLLADA loader for Xith. Click on the "Home Page" link above to install.
JMatrixView is aJava/Swing matrix viewer. It works with Colt matrix implementation. It features dynamically tunable row/column resolution and has been designed for sparse matrix.
Prenzl!! is a desktop application and a screen saver running artistic cellular automata. The application is based on an Eclipse architecture and the rules can be in native. Our mission is to provide a viewer and an SDK for this kind of art, called CArt.