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The JChemPaint Applet and Swing Application are Java programs for drawing 2D chemical structures like those found in most chemistry textbooks. It is based on the Chemistry Development Kit (cdk.sf.net). Downloads, tracker, and source code repository can be found on https://jchempaint.github.io
Digital graph 1.3 is an advanced JAVASWING component for modelling, displaying, saving and loading graphs(using XML and XMLSchema). It is fully documented and requires jdk 1.5.x.Version 1.3 adds 9 bug fixs, 3 rengineering and 4 new features.
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The Information Visualization Cyberinfrastructure is a graphical tool with diverse modeling, analysis, and visualization algorithms for education and research. This tool is built on CiShell: Cyberinfrastructure Shell.
Diagram (JGraph) driven simulator. Bondgraphs > nonlinear differantial system > plot: implemented for economics and ecology. Network analysis: emergy propagation implemented. Would also fit for electronics, mechanics, cost, GWP, footprint analysis.
The Macro Agent Transport Event-based Simulator (MATES) is intended to efficiently investigate the behavior of distributed agent based systems over mobile ad hoc networks (MANETs). MATES provides an expandable environment for agent-based system testing.
Waters - the Waikato Analysis Tool for Events in Reactive Systems.
This software will enable users to create finite-state machine models in a graphical user interface, to simulate their execution, and to apply model checking algorithms to them.
msgnet is a library that implements a simulation framework with visualisation for message passing networks.
This might be useful for teachers and students of distributed systems courses.
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NanoGraph is a java component for graph visualisation. It aims to visualize domain oriented object models without requiring code changes to these models. Design goals include a small footprint and Swing/SWT/SVG support.
MicroArray Genome Imaging and Clustering Tool (MAGIC tool) is a platform-independant java program for analyzing MicroArray data (.tiff scans & .txt godlists) via graphs and clustering operations (including QT-clustering). http://www.bio.davidson.edu/magic
The Generation5 Java Development Kit (JDK) enables users to create demonstration programs and applets for a wide variety of Artificial Intelligence and Artificial Life paradigms.
OO-Widgets is a JavaSwing project that makes the JTable and other components much easier to use. This library differs from other Swing libraries in that it displays any set of pre-existing objects or JavaBeans.
A Java software for 3D visualization of graphs/networks. It implements many graph layout algorithms (such as force-directed methods), graph generators (such as scale-free networks) and graph modifiers. Most functions can be accessed through its GUI.
Chaotic Attractors is a JAVA program to generate images of chaotic attractors. Chaotic attractors are used in chaos theory. Even though they have their seeds in science, they are very artistic. They are great as wallpaper, too.
PolyTreeTable is a Swing Component that can display a graph where nodes have multiple parents (polyhierarchy). There is a focus node, a parent tree above, a child tree below, parents expand upwards. It is a JTable derivate with multiple columns.
JOpenChart is an open source Java library and toolkit for creating different kinds of charts and embedding them into web applications or Swing applications. It further supports interpolating data and plotting mathematical functions etc. pp.
jChart is a free Java library for drawing complex business & scientific charts. It may be used in Java applications and applets as a Swing-like GUI component, and also in servlets to publish the charts on the Web in several formats.
jlpv is a Java Light PACS Viewer application useful for review series or images from DICOM data retrieved from the DCM4CHEE PACS system. It also uses ImageJ as a rendering engine or viewer. This project is in a early stage.
Ged(Pluginable Graph Editor) is modern visual Graph Editor, written on java, with pluginable interface for different algorithms on graph's and different graph's formats.
SCTMF is an in development progress software aimed to educational learning of Formal Models, used in Computer Theory course.
The meaning of SCTMF is Sistema para Criação e Testes de Modelos Formais (Formal Model Creation and Tests System).