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Scaffold Hunter is a JAVA-based software tool for the analysis of structure-related biochemical data. It enables generation of and navigation in a scaffold tree hierarchy annotated with various data.
Atera all-in-one platform IT management software with AI agents
Ideal for internal IT departments or managed service providers (MSPs)
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Workbench for visualizing biological networks (regulatory, interaction, and metabolic). Can be used as a front-end for BNDB datawarehouses, but also as stand-alone tool.
XNBC is a graphic application to simulate biologic neural networks.
XNBC is a full featured application for computer naive neuroscientists. It simulates biological neural networks using graphic tools to edit neurons and networks, to run the simulation and to analyze results. Written in C, it runs on Unix and Windows.
Web site : http://ticemed-sa.upmc.fr/xnbc/
All recent versions are on this site.
Description
Reveal Desktop is a web 2.0 data entry tool applicable for archaeological or other types of hierarchical relationships.
Is makes use of the following open source tools and frameworks.
Extjs 3.3
qwikiOfice
php 5+
apache2
mysql
This tool provides an interactive visualization of the Wikipedia information space, primarily as a means of navigating the category hierarchy as well as the article network. The project is implemented in Java, utilizing the Java 3D package.
This was a student project in 2004-2005 at the University of Macau. This is the code from April 2005 that was finally uploaded to SourceForge in 2012 for archival purposes and to meet the demand from Wikipedia researchers world-wide.
Web based tool for showing RRDtool graphs and other statistics. Something like syweb from symon package, but more customizable with Smarty templates for graphs and screens.
SPIDR (Space Physics Interactive Data Resource) is a distributed database and application server network, built to select, visualize and model historical space weather data. SPIDR is a web-application and a grid of data mining web-services.
BINViz(Bidirectional Interactive Network Visualization) is a JavaScript library for network and graph visualization. The goal of this tool is to provide a better way to visualize complex graphical models and the underlying data in a web-based environ
It provides a graphical animated representation of a network simulation run (e.g. for ns-2). Further, common metrics are calculated and displayed. The tool is written in Java and supplies 2 frontends (applet and stand-alone application).
Nodemon is a visualization tool for monitoring system resource utilization. It was developed for monitoring the Columbia supercomputer, a 10,240-processor Linux system at NASA Ames Research Center. It can monitor resources on any Linux system or cluster
Visualization of finite state machines as a network graph. Accepted input files at the moment are: net files exported from xfst (Xerox Finite-State Tool) and lexc files (Finite-State Lexicon Compiler).
Generic packet visualization tool for generating flow diagrams from formatted logs. Can be used for cache coherency diagrams, software interaction diagrams or to plot network communications.
W.H.A.T. is an analytic tool for Wikipedia with two main functionalities: an article network and extensive statistics. It contains a visualization of the article networks and a powerful interface to analyze the behavior of authors.
The goal of this project is to be an improvement of the original Network Animator (NAM) module provided as part of the Network Simulator 2 (NS2). This tool provides topology visualization, TCL script generation, and enhanced simulation animation.
WikiVis is a tool to analyze Wikipedia based on several aspects. The main objective is to visualize the conclusions of this examination, which focusses on the editing frequency and relevance of articles and categories as well as the activity of users.
Dumpling is a web based network analyzer written in PHP and MySql database.
suitable for tcpdump / windump file outputs. Gives a visual display of the network traffic.
The NEtwork Visualisation Environment is a framework for 3D-visualisation of and interaction with networks, especially communication networks as the internet in both real time and as a simulation tool. Based on JMX/Java3D.
Object Relational Persistence and Object-Based SQL Query API. Similar to that of Hibernate or JDO but much better structured design. This API has several layers of abstraction to be useful for nearly any situation.
jpcap is a set of Java classes which provide an interface and system for network packet capture. A protocol library and tool for visualizing network traffic is included.
jpcap utilizes libpcap, a widely deployed system library for packet capture.
wlandscape is a tool for collecting access point data of public wireless networks ( wlan ) in order to share it with anyone. It also supports gps and visualisation with the help of topographical maps. Visit our homepage for further informations.
S.o.n.a.r. is an analysis- and visualization tool developed for the popular business network XING (www.xing.com).
Registered XING users can search for companies and contact their personnel manager or other decision makers, i.e. for a job application.