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Avenzoar is a one-year exploration of renal cell carcinoma morphology and its related single nucleotide polymorphisms (SNPa) as a method of automating diagnosis of cancer by using a computer-aided decision tree controlled by analytical statistics.
TNV visualizes pcap data to graphically depict network packets, links, and ports for network traffic analysis to facilitate learning what constitutes 'normal' behavior, investigating security events, or network troubleshooting.
JAVA based tool for easy and realtime monitoring (RTM) of data streams or groups of data streams. This tool makes it easy to monitor inherent distributed or multi-threaded applications like e.g. agent systems, financial data, logistics, RFID Systems
Construct and management virtual clusters which the nodes of the clusters running on the virtual machine rather than native machine. Fast install and switch virtual clusters. Efficiently storage vm images. support variant VMMs.
Frtplot is a program for plotting your numeric data (such as output from simulations, or sensors) in real time. It can read data of a configured (text) format from the standard input, and display all changes immediately.
ProgPorts is an administrative and easy user interface to hundreds of proteomics, molecular dynamics, and protein crystallography programs. It is a hybrid of the prog/setup system, developed at Johns Hopkins University, and GNU-Darwin ports system.
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JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion of file formats, 100% pure Java, and interfaces to external programs (e.g. Ghemical) are available.
FElt is an open source system for finite element analysis, primarily for mechanical problems. FElt includes command line tools, an X11 interface for pre- and post-processing, and a Windows editor interface with some post-processing capabilities.
SYSTEM FOR DESIGNING AND SIMULATE CONCURRENT AND DISTRIBUTED PROGRAMS IN CLUSTER ARCHITECTURE Provides graphical interface for configuring relationships between cooperating, abstract processes and simulate it in real cluster environment, using MPI.
This library provides an easy interface to Gnuplot (http://www.gnuplot.info/) from OCaml (http://caml.inria.fr/) for static 2D and 3D graphs and simple animations. This library aims to be portable on all platforms OCaml runs on.
Vegetation3D is a library for realistic visualization of vegetation. Every phase of this process, such as plant topology generation (L-System) or mesh generation may be controlled and used separately.
Franklin Math is an open source Java symbolic computer algebra system (CAS), with similarities to commercial math packages such as MATLAB or Mathematica. It allows numeric and symbolic calculations, with built-in functions including plotting commands.
DemoScript runs commandline-based demos. It logs to a remote host (ssh), writes the password, and then writes the commands specified in a script. The tool mimics someone's typing: delay between each letter and intelligent command sending synchronisation.
The Olduvai bioinformatics visualization system allows side by side comparison of:
TreeJuxtaposer: evolutionary trees
SequenceJuxtaposer: genomic sequences
GParticles is a tool to simulate the growth behaviour of two- and three-dimensional nano particles based on a simple grid model, with adjustable (time-dependent) concentrations of the particle's different components.
Software tools for building interactive information visualization applications. Prefuse supports a rich set of features for data modeling, visualization, animation, and interaction for both Java (prefuse) and Flash (prefuse flare).
glomp is an open source multipipe OpenGL library. Its intent is to automatically distribute 3D graphics computations over multiple graphics card on the same machine.
BINViz(Bidirectional Interactive Network Visualization) is a JavaScript library for network and graph visualization. The goal of this tool is to provide a better way to visualize complex graphical models and the underlying data in a web-based environ
StormForce is a free open source program written in Python/PyGame for the Boltek LD-250/StormTracker. StormForce works in FreeBSD, Linux, and Microsoft Windows.