Search Results for "quality"
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Showing 121 open source projects for "quality"
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gt R
Easily generate information-rich, publication-quality tables from R
With the gt package, anyone can make wonderful-looking tables using the R programming language. The gt philosophy: we can construct a wide variety of useful tables with a cohesive set of table parts. These include the table header, the stub, the column labels and spanner column labels, the table body, and the table footer. It all begins with table data (be it a tibble or a data frame). You then decide how to compose your gt table with the elements and formatting you need for the task at... -
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Makie
Interactive data visualizations and plotting in Julia
...The backend packages GLMakie, WGLMakie, CairoMakie and RPRMakie add different functionalities: You can use Makie to interactively explore your data and create simple GUIs in native Windows or web browsers, export high-quality vector graphics or even raytrace with physically accurate lighting. Choose one or more backend packages: GLMakie (interactive OpenGL in native OS windows), WGLMakie (interactive WebGL in browsers, IDEs, notebooks), CairoMakie (static 2D vector graphics and images), and RPRMakie (raytracing). Each backend re-exports all of Makie.jl so you don't have to install or load it explicitly. -
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Clustering.jl
A Julia package for data clustering
Methods for data clustering and evaluation of clustering quality. -
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Compose.jl
Declarative vector graphics
Compose is a vector graphics library for Julia. It forms the basis for the statistical graphics system Gadfly. Compose is a declarative vector graphics system written in Julia. It's designed to simplify the creation of complex graphics and serves as the basis of the Gadfly data visualization package. -
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PGFPlotsX.jl
Plots in Julia using the PGFPlots LaTeX package
PGFPlotsX is a Julia package to generate publication quality figures using the LaTeX library PGFPlots. It is similar in spirit to the package PGFPlots.jl but it tries to have a very close mapping to the PGFPlots API as well as minimize the number of dependencies. The fact that the syntax is similar to the TeX version means that examples from Stack Overflow and the PGFPlots manual can easily be incorporated in the Julia code. -
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Matplotlib
matplotlib: plotting with Python
Matplotlib is a comprehensive library for creating static, animated, and interactive visualizations in Python. Matplotlib makes easy things easy and hard things possible. Matplotlib ships with several add-on toolkits, including 3D plotting with mplot3d, axes helpers in axes_grid1 and axis helpers in axisartist. A large number of third party packages extend and build on Matplotlib functionality, including several higher-level plotting interfaces (seaborn, HoloViews, ggplot, ...), and a... -
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DynamicalSystems.jl
Award winning software library for nonlinear dynamics timeseries
...To learn how to use it and see its contents visit the documentation, which you can either find online or build locally by running the docs/make.jl file. DynamicalSystems.jl is part of JuliaDynamics, an organization dedicated to creating high-quality scientific software. All implemented algorithms provide a high-level scientific description of their functionality in their documentation string as well as references to scientific papers. The documentation features hundreds of tutorials and examples ranging from introductory to expert usage. -
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Matplot++
Matplot++: A C++ Graphics Library for Data Visualization
...Besides the option of exporting results to other environments, the customary alternatives in C++ are either non-dedicated libraries that depend on existing user interfaces or bindings to other languages. Matplot++ is a graphics library for data visualization that provides interactive plotting, means for exporting plots in high-quality formats for scientific publications, a compact syntax consistent with similar libraries, dozens of plot categories with specialized algorithms, multiple coding styles, and supports generic backends. -
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gramm
Gramm is a complete data visualization toolbox for Matlab
Gramm is a MATLAB toolbox that enables the rapid creation of complex, publication-quality figures. Its design philosophy focuses on a declarative approach, where users specify the desired end result, as opposed to the traditional imperative method involving for loops, if/else statements, etc. The MATLAB implementation of gramm is inspired by the "grammar of graphics" principles (Wilkinson 1999) and the ggplot2 library for R by Hadley Wickham. -
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ggpubr
'ggplot2' Based Publication Ready Plots
ggpubr is an R package that provides easy-to-use wrapper functions around ggplot2 to create publication-ready visualizations with minimal code. It streamlines plot creation for researchers and analysts, allowing features such as statistical annotation, theme customization, and plot arrangement with fewer lines of code. -
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plotly.js
JavaScript charting library behind Plotly and Dash
Plotly JavaScript Open Source Graphing Library. Built on top of d3.js and stack.gl, Plotly.js is a high-level, declarative charting library. plotly.js ships with over 40 chart types, including 3D charts, statistical graphs, and SVG maps. plotly.js is free and open source and you can view the source, report issues or contribute on GitHub. For plotly.js to build with Webpack you will need to install ify-loader@v1.1.0+ and add it to your webpack.config.json. This adds Browserify transform... -
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rayshader
R Package for 2D and 3D mapping and data visualization
...At its core, rayshader takes a matrix of elevations and applies shading, texture, ambient occlusion, overlays, and light modeling (ray shade, lambertian shading, etc.) to produce realistic relief maps. Users can rotate, zoom, and animate the scenes or script camera trajectories programmatically. It supports outputting high-quality renders via path tracing (using a companion package) and also offers depth-of-field (“cinematic blur”) effects to bring visual focus into scenes. It allows layering relational data (roads, points, polygons) on top of the shaded terrain, so you can combine spatial data overlays with the 3D model. The package can export models to 3D formats like STL or OBJ for 3D printing or external rendering. -
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ColorSchemes.jl
colorschemes, colormaps, gradients, and palettes
Color schemes, colormaps, gradients, and palettes. Choose ColorSchemes with care. Refer to Peter Kovesi's PerceptualColourMaps package, or to Fabio Crameri's Scientific Colour Maps for more information. If you want to make more advanced ColorSchemes, use linear-segment dictionaries or indexed lists, and use functions to generate color values, see the make_colorscheme() function in the ColorSchemeTools.jl package. -
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awesome-single-cell
Community-curated list of software packages and data resources
...Ascend is an R package comprised of fast, streamlined analysis functions optimized to address the statistical challenges of single cell RNA-seq. The package incorporates novel and established methods to provide a flexible framework to perform filtering, quality control, normalization, dimension reduction, clustering, differential expression and a wide-range of plotting. An analytical framework for big-scale single cell data. Transform percentage-based units into a 2d space to evaluate changes in distribution with both magnitude and direction. -
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TIGRE
TIGRE: Tomographic Iterative GPU-based Reconstruction Toolbox
TIGRE is an open-source toolbox for fast and accurate 3D tomographic reconstruction for any geometry. Its focus is on iterative algorithms for improved image quality that have all been optimized to run on GPUs (including multi-GPUs) for improved speed. It combines the higher-level abstraction of MATLAB or Python with the performance of CUDA at a lower level in order to make it both fast and easy to use. TIGRE is free to download and distribute: use it, modify it, add to it, and share it. Our aim is to provide a wide range of easy-to-use algorithms for the tomographic community "off the shelf". ... -
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a R package. 'Qair' gives access to data bases used by air quality monitoring associations in France. It also contains functions to manipualte air quality datas.
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GLE is a graphics scripting language designed for creating publication quality graphs, plots, diagrams, figures, and slides. Text can be formatted with LaTeX/TeX markup. Its output formats include EPS, PS, PDF, JPEG, and PNG. GLE can operate as either a command line or GUI application.
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QUAST
Quality Assessment Tool for Genome Assemblies
QUAST performs fast and convenient quality evaluation and comparison of genome assemblies. It is maintained by the Gurevich lab at HIPS (https://helmholtz-hips.de/en/hmsb). For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). ... -
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Asymptote
2D & 3D TeX-Aware Vector Graphics Language
Asymptote is a powerful descriptive vector graphics language for technical drawing, inspired by MetaPost but with an improved C++-like syntax. Asymptote provides for figures the same high-quality typesetting that LaTeX does for scientific text. -
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LabPlot
Data Visualization and Analysis
LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone. -
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MathGL
A library for scientific data visualization
A free cross-platform library of fast C++ routines for the plotting of up to 3-ranged data. It can export to bitmap and vector EPS/SVG files. There are window interfaces (GLUT/FLTK/Qt) and console tools. MathGL can be used from C/Fortran/Python/Octav/Lua -
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JaxoDraw
JaxoDraw: Feynman Diagrams made easy!
JaxoDraw is a tool to generate Feynman diagrams in a mouse click-and-drag fashion. Graphs can be exported to a variety of graphics formats and arbitrary latex code can be used for labels to produce high-quality publishing-style figures. -
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Hypercube
Graph visualizing tool
Hypercube is a tool for visualizing DOT (graphviz), GML, GraphML, GXL and simple text-based graph representations as SVG and EPS images. Hypercube comes with a Qt based GUI application and a Qt-independent command-line tool. It uses a simulated annealing algorithm to lay out the graph, that can be easily parameterized to achieve the desired look. The main development goals are portability and easy usage rather than high performance and complexity. -
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RLPlot is a scientific plotting program to produce high quality graphs from data. It is a cross platform development written in C/C++ and may be compiled under Windows32 or Linux. RLPlot for Linux uses Trolltech's Qt.
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Charmol
Program for molecular graphics
Charmol is a cross-platform GUI/command-line based program for making high-quality pictures of molecular structures, nowadays working on Linux, MacOS and Windows. As output, it produces POV-Ray rendered images or files in VRML format. Charmol is capable of making pictures containing: - from small- to large-size molecules - more molecules together (different settings possible) - orbitals using molden and fchk files (GTO functions up to 'h' angular momentum supported) - surfaces using gaussian cube files (also color-mapped surfaces according to potential) - schematic representation of vibrations using arrows - user-defined arrows representing vectorial properties - measuring gauges - combinations of these features (more orbitals together, orbitals and arrows together etc.) ...