Showing 987 open source projects for "gnu science"

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  • 1
    quickplot

    quickplot

    interactive 2D plotter

    Quickplot is a fast interactive 2D plotter with infinite zooming, value picking, pipe input, and unlimited plots displayed. Quickplot is meant for looking at your data quickly and of secondary importance is making static pictures of your data.
    Downloads: 6 This Week
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  • 2
    Biorec - Bioreactor controller

    Biorec - Bioreactor controller

    Bioreactor control software for BioFlo® fermentors

    Biorec is an open source control software written for Windows operating systems to provide data logging, process monitoring and control for pilot and laboratory scale BioFlo® series (Eppendorf AG, Hamburg/Germany) fermentors/bioreactors. The supported models are BioFlo® III and BioFlo® 3000 (other models have not been tested in action). Biorec supports process automation through a user programming environment that allows controlling pumps, temperature or agitation by mathematical...
    Downloads: 0 This Week
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  • 3
    SPIW - Scanning Probe Image Wizard

    SPIW - Scanning Probe Image Wizard

    Scanning Probe Image Wizard - MATLAB Toolbox

    SPIW is a MATLAB toolbox, for automated processing of scanning probe microscope images. Tools are applicable to all SPM images, but the main focus is on images with atomic or molecular resolution. SPIW is primarily a MATLAB toolbox with functions designed to be called in a user's own script. SPIW also has a very basic GUI for browsing and exporting images. For information on SPIW's performance see our publication ( http://dx.doi.org/10.1063/1.4827076 ) in the Review of Scientific...
    Downloads: 0 This Week
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  • 4
    RoiView
    Explore InSAR data and more
    Downloads: 0 This Week
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  • 5
    PANorama2.0

    PANorama2.0

    PANorama: Panicle phenotyping for Oryza sativa

    PANorama is a Linux-compatible, open-source software package for panicle image acquisition, processing, and phenotyping. PANorama 2.0 contains new phenotype measurements and is available for download within the "Files" tab listed above. Installation and user instructions are located within the "Wiki" tab. How to videos are available for streaming at the link below, or for download in the "Files" tab above. Information regarding the project and funding can be found at...
    Downloads: 0 This Week
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  • 6
    wxRays

    wxRays

    Visual x-ray data processor

    Visual x-ray data processor. The routine, writed in Python using wxPython, NumPy, SciPy and mathplotlib libraries for practical and educational purpose.
    Downloads: 0 This Week
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  • 7
    New Terrain and 3D Map System

    New Terrain and 3D Map System

    a very lightweight advanced terrain-rendering and 3D map rendering sys

    A very lightweight advanced terrain-rendering and 3D map rendering system. Minimal dependencies: OpenGL, SDL. It's distrib in 2-3 separate modules: 1. the C++ implementation of the terrain- and/or surface- rendering Algorithms I have developed: both a multithread and a non-multithread variant is relaeased. 2. Seme as at point 1. , but with a road-network rendering and collision-detection module I wrote before. It also adds some trees at the top of the terrain. (multitread vesion not...
    Downloads: 0 This Week
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  • 8
    Fiji is an image processing package based on ImageJ.
    Downloads: 7 This Week
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  • 9
    Analysis software for Nbody/SPH or SPH simulations (e.g. performed with Gadget II). See http://sourceforge.net/apps/wordpress/hyplot/about and http://sourceforge.net/apps/trac/hyplot/wiki for more information.
    Downloads: 0 This Week
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  • 10
    Argunet

    Argunet

    argument map editor for analyzing and visualizing complex debates

    Argunet is a client-server software for computer-supported argument visualization (CSAV). Reconstructed debates are visualized as argument maps and can be shared through the Argunet Server.
    Downloads: 6 This Week
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  • 11
    Peklo is a graph editor and an environment for visualizing and comparing different algorithms for some graph-theoretic problems, e.g. flows, shortest path, minimum spanning tree.
    Downloads: 0 This Week
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  • 12
    The MeVisLab Community project provides add-on modules that extend the functionality of the MeVisLab software. The modules are provided and maintained by the MeVisLab developer community and can be compiled with the public MeVisLab SDK.
    Downloads: 0 This Week
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  • 13

    cimgexplorer

    Exploration and analysis program for (scientific) images

    CImgExplorer is an exploration and analysis program for (scientific) intensity images. It shows floating-point and integer intensity images in a false-colour display and allows range adjustment, zooming, histogram optimisation, and simple evaluation. Reads most formats using GDAL.
    Downloads: 0 This Week
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  • 14
    PaPCo is modular IDL software for the analysis, distribution and display of science data products. Primarily used by the space science community but in principle suited for any time ordered data products.
    Downloads: 0 This Week
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  • 15

    oasis-genomics

    Oasis Genomics cancer omics integration portal

    OASIS is an application that enables complex analytical queries across somatic mutations; copy number changes (CNV); and gene expression data. OASIS has been built on top of the BIoMart frameworks and has been extended to incorporate unique tools and visualizations to facilitate analysis of complex cancer "Omics" datasets.
    Downloads: 0 This Week
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  • 16

    PNGwriter

    Easy plotting of images pixel by pixel!

    Frustrated because you want to output a high-quality image from your C++ program but haven't found an easy, direct and fast way? Try PNGwriter. Written with scientific simulations in mind, PNGwriter allows you to plot to a PNG image pixel by pixel. * * *README* * * This is the last PNGwriter release that will be hosted on SourceForge.net. Please use the following site: https://github.com/pngwriter/pngwriter/releases to find all versions of PNGwriter including and later than...
    Downloads: 1 This Week
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  • 17
    Universal Java Matrix Package

    Universal Java Matrix Package

    sparse and dense matrix, linear algebra, visualization, big data

    The Universal Java Matrix Package (UJMP) is an open source Java library which provides sparse and dense matrix classes, as well as a large number of calculations for linear algebra such as matrix multiplication or matrix inverse. Operations such as mean, correlation, standard deviation, replacement of missing values or the calculation of mutual information are supported, too. The Universal Java Matrix Package provides various visualization methods, import and export filters for a large...
    Downloads: 0 This Week
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  • 18

    iSBatch

    Hyearchical Data Processing Plugin for ImageJ

    iSBatch is a Java-based plugin for ImageJ (version 1.49d) or its distribution Fiji. iSBatch is designed for quick evaluation of analysis pipelines and visual exploration of datasets. It is distributed under an open open-source license (GNU General Public License, version 3). The plugin handles the data in a hierarchical fashion based on a source folder containing all data and little guidance provided by the user. The software is designed for rapid exploration of large datasets and...
    Downloads: 0 This Week
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  • 19

    Python Open Source Echosounder Toolkit

    real-time visualization of network data broadcasts from echosounders

    During acoustic surveys of marine ecosystems, fisheries scientists need to quickly interpret large amounts of echosounder data and decide whether and where to sample for targeted organisms. The Python Open Source Echosounder Toolkit (pyOSET) was designed to facilitate this process by providing near real-time visualization of network data broadcasts from multiple echosounder systems, and to serve as a framework for implementation of algorithms to detect, locate, and identify fish or the...
    Downloads: 0 This Week
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  • 20
    DSAquire

    DSAquire

    Data aquasition software for Thurlby DSA524

    DSAquire allows you to download and plot trace data from a Thurlby DSA524 digital storage adaptor (it's a 25 year old instrument, but better late than never, eh?). The data is downloaded via an RS232 serial link using a null modem cable. You can export the plot as an image or export the data in real-world units as a csv file. This software runs under Linux and also under Windows XP and later using Cygwin. Pre-compiled binaries are supplied, as are full sources under the GPL. The...
    Downloads: 1 This Week
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  • 21

    Pyxplot

    Graph Plotting Package and Scientific Scripting Language

    Pyxplot is a scientific scripting language, graph plotting tool and vector graphics suite. It runs in a command-line environment under Linux, Mac OS X, and other POSIX systems.
    Downloads: 0 This Week
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  • 22
    BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional, multi data channel, time series image data from microscopy and other sources.
    Downloads: 3 This Week
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  • 23

    GraspIt

    A simulator for robotic hands.

    A simulator for robotic hands. This repository still contains the (somewhat outdated) releases and user manual. For the latest source code (recommended) please go to https://github.com/graspit-simulator
    Downloads: 0 This Week
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  • 24
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
    Downloads: 0 This Week
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  • 25
    Qi - Quantitative Imaging (PIV and more)

    Qi - Quantitative Imaging (PIV and more)

    A collection of MATLAB tools for PIV, PTV, particle sizing, and more.

    Qi is a collection of MATLAB tools for the quantitative analysis of flow field images. Our Particle Image Velocimetry (PIV) tool, prana, implements a Robust Phase Correlation kernel for PIV analysis, and now includes Particle Tracking Velocimetry and sizing tools. Tools for pressure calculation, proper orthogonal decomposition (POD), and 3d imaging are under development.
    Downloads: 1 This Week
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