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IMPORTANT NOTICE:
This project has moved to GitHub:
https://github.com/sarahtattersall/PIPE
Releases will be posted here, but please check on GitHub for the most recent activity.
Create, model and analyse Petri nets with a standards-compliant Petri net tool. PIPE2 is the active fork of the Platform Independent Petri net Editor project, which originated at Imperial College London.
...It provides functions for 2D/3D grascale/color image creation, filtering, or measurement. It requires, and complements Matlab Image Processing Toolbox.
Important notice: the project is now hosted in GitHub, https://github.com/dlegland/matImage
...It visualize the collected data in a user friendly interface and generates nice data plots (2D/3D histogramms, pie-charts, xy-charts)
Update: Traviz has moved to GitHub https://github.com/splattner/traviz
It uses two different solutions:
- placing of circles closest to the center from the largest to smallest, see brianshaler on github https://github.com/brianshaler/Circle-Packing-in-Processing
- simulation "real" world with use of a Java Physics Engine JBox2D, see http://www.jbox2d.org
...It implements a compact, binary format which allows rapid access to data, even with hundreds of thousands of observations.
PLEASE NOTE: This source repository is no longer active. See the github link above for the latest version.
An application built onto the Open Table Explorer engine for the acquisition and analysis of home energy consumption and solar energy production.Moved to github as Open Table Explorer
Skittle is a 2D visualization of genome sequence files. The program assigns four colors to the four nucleotides and text wraps the sequence to create a 2D picture based on the DNA sequence. Great for researching tandem repeats and chromosome structure.
Compiled downloads available at http://dnaskittle.com/
Source maintained at https://github.com/josiahseaman/skittle
...The principal trait of this library is its ability to manage (create, edit, layout, display) continuously evolving graphs.
The development of this project now takes place on Github. Visit the official Graphstream website at http://graphstream-project.org
A 3D engine for virtual globes designed to illustrate engine design and rendering techniques described in our upcoming book. OpenGlobe is written in C# and uses OpenGL 3.3 core profile (via OpenTK).
OpenGlobe is now also on GitHub: https://github.com/virtualglobebook/OpenGlobe
cy2reposition: Cytoscape 2 plugin for layout reuse
CyReposition is an open source Cytoscape Plugin for the reuse of existing Cytoscape network layouts in new Cytoscape projects.
This project migrated to github
https://github.com/matthiaskoenig/cy2reposition
JUNG provides a common and extendible language for the modeling, analysis, and visualization of data that can be represented as a graph or network.
New version now available on GitHub: https://github.com/jrtom/jung/releases/tag/jung-2.1
Robotic Manipulator Development and Simulation Environment in Python and Blender. IMPORTANT: Development moved to github. http://github.com/ajnsit/r2d3