Search Results for "open java projects"

Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data....

Arthropod Easy Capture (AEC) is an arthropod specific, open-source solution for handling specimen level host interactions. Developed in conjunction with the Plant Bugs Planetary Biodiversity, Tri-Tropic Interactions TCN, and Bee Database projects, AEC is designed for rapid, and accurate data capture, utilizing controlled vocabularies to maintain data quality. The application is Web-based, allowing for collaboration from multiple partners to a centralized, easily maintainable, database. ...