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NGS data quality evaluation

Python tool to evaluate the quality of high-throughput sequencing data

ngsdataqeval is a Python tool to evaluate the quality of high-throughput sequencing data, used by Next Generation Sequencing. Unlike other tools that analyze raw data, this is designed to evaluate the quality of the processed reads after mapping to a reference genome. The evaluation is performed in a genomic region defined by the user, and it provides some statistics computed from the reads that map to that region (ie. a single gene).

Downloads: 0 This Week

Last Update: 2014-09-06
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