Showing 2 open source projects for "program"

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    Arthropod Easy Capture

    An arthropod specific, specimen level data capture application

    ...The application is Web-based, allowing for collaboration from multiple partners to a centralized, easily maintainable, database. The AEC community, as part of the Advancing Digitization of Biodiversity Collections (ADBC) program, is already tasked to develop the appropriate Web service for sharing data with the iDigBio data portal. This includes the application of Globally Unique Identifiers (GUIDs) for specimens, and mapping relevant data fields to DarwinCore. iDigBio is the aggregator for all of the ADBC Thematic Collection Network projects, including trophic level interaction data from the Tri-Tropic Interactions TCN.
    Downloads: 0 This Week
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    NGS data quality evaluation

    Python tool to evaluate the quality of high-throughput sequencing data

    ...The evaluation is performed in a genomic region defined by the user, and it provides some statistics computed from the reads that map to that region (ie. a single gene). The program provides a graphical output embedded in an html file. The analysis contains the sequencing quality along the reads, the mapping quality distribution, the coverage of the defined region, the overall quality at each nucleotide position, and the distribution of the coverage as a function of the GC content in the reference genome. The results provided by this program can help to distinguish between sequence variation and sequencing errors.
    Downloads: 0 This Week
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