Search Results for "linux programs" - Page 3

MolBioLib is a compact, portable, and extensively tested C++11 software framework and set of applications tailored to the demands of next-generation sequencing data and applicable to many other applications. MolBioLib is designed to work with common file formats and data types used both in genomic analysis and general data analysis. A central relational-database-like Table class is a flexible and powerful object to intuitively represent and work with a wide variety of tabular datasets,...

Ccide reads a source program, in one of several programming languages, expands all embedded decision tables, and generates the new, expanded source. Ccidew processes C language programs directly. The script, ccide, uses ccidew and m4, to process BASIC, JAVA, CC, C++, BASH, QB, VB, and EX(euphoria), source files containing embedded decision tables. Ccide checks all conditions once and only once, avoiding side effects. Ccide checks tables for conflicts and other...

GODASM is the brief of ".Gff Organized Data Analysis System for Microarray Studies". Private programs, GODA system, had been successful developed in 2008 at CGMH,Taiwan. Now the project will transfer GODAs to open-source based system.

This project provides a java implementation of the Captcha project ( see http://www.captcha.net ). A CAPTCHA is a program that can generate and grade tests that: -Most humans can pass. -Current computer programs can't pass.

Parse, analyze and -- most importantly -- use COBOL data definitions. This gives you access to COBOL data from Python programs. Write data analyzers, one-time data conversion utilities and Python programs that are part of COBOL systems. Really.

Vimes: Visual interface to materials simulations - An open source, python/Open GL interface to molecular and materials simulation programs

JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion of file formats, 100% pure Java, and interfaces to external programs (e.g. Ghemical) are available.

SYSTEM FOR DESIGNING AND SIMULATE CONCURRENT AND DISTRIBUTED PROGRAMS IN CLUSTER ARCHITECTURE Provides graphical interface for configuring relationships between cooperating, abstract processes and simulate it in real cluster environment, using MPI.

GardenSketch (previously iGarden) is a set of programs to aid in designing your garden or larger landscape project.

KAGEfx is a framework to load shader programs based on the OpenGL Shading Language contained within an XML file that holds descriptive metadata about the shader and to replace shader modules on the fly with respect to their level-of-detail metadata.

A package of programs for performing extended Hueckel calculations on molecules and solids and visualizing the results. Visualization functionality for some quantum packages (ADF and LMTO) is also provided.

IVuPy is a set of Python bindings for the Coin3D C++ class libraries which serve to create software for 3D visualization in science and engineering. IVuPy aims to be a solid basis for large Python programs for 3D visualization and data analysis.

The JChemPaint Applet and Swing Application are Java programs for drawing 2D chemical structures like those found in most chemistry textbooks. It is based on the Chemistry Development Kit (cdk.sf.net). Downloads, tracker, and source code repository can be found on https://jchempaint.github.io

ModuleFair is a generic, module-based framework upon which to quickly build anything from data analysis programs to game level editors. This project is no longer maintained.

openplot is a plotting library and support programs using OpenGL and C++ (possibly Java at a later stage). openplot is: * open source * OpenGL * open for business scientific plotting and graphics application

The Generation5 Java Development Kit (JDK) enables users to create demonstration programs and applets for a wide variety of Artificial Intelligence and Artificial Life paradigms.

Z88 a free finite elements program featuring 20 different element types for LINUX and Windows. Includes two solvers, a mesher, plot programs and a GUI with online help.

Web interface to a prolog interpreter, where you can load prolog programs, do consults, and visualize the resolution tree in SVG.

AQUYNZA is a set of C++ libraries, sample programs and doc's for the modelling, visualization and persistence of 3D environments. Its modular and highly portable. Its primary objective is helping to learn (and teach) computer graphics. (code in SPANISH)!

A Java program to parse chemical names using IUPAC nomenclature. The output can be either a visualisation of the molecule, or in a form for other programs to use (e.g. CML).

JViz is a prototype 3d visualization application that was created to help beginning Java programmers understand the structure, design and coding habits of their Java programs, and which parts of their programs need the most improvement.

Mandel is a command-line program for generating Mandelbrot set fractals - support for Julia sets is coming soon. Output is in the form of 8 bit greyscale Device Independent Bitmaps, which can be readily viewed with many common graphics programs.

PLOT_PSXPS provides a set of graphic functions that allows the generation of PostScript files (and runtime viewing with X) from C/C++ programs. A page can contain points, lines, arcs, ellipses, circles, boxes, text, included EPS files and a lot more.

DISCONTINUED SimSimSim offers help for writing simulation-like programs, by taking care of mundane issues such as managing the display window, 3D rendering (X, OpenGL, etc), simulation control (start/stop), random number generation, settings, message l