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This is a collection of different little tools written in MATLAB, JAVA, Python. They all have to to do with Imaging & Microscopy for life science research and related topics or problems. Some of them are meant to be used with ImageJ and MicroManager.
General plugins for the QGis tool http://www.qgis.org. The plugins will be mostly written in python language. The idea is to contribute to the GIS open source software community.
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ThemaVis is a Python library for thematic cartography. It allows creating print-quality (as SVG files) and interactive maps (for OpenLayers using the ThemaVis JavaScript library) in a easy and automatic way.
StreamMine is a distributed event processing (streaming) infrastructure.
You can create low-latency, fault-tolerant stream processing functionality with any stream-oriented operators that can be implemented in Python.
A python tool for data analysis of FLEXPART transport modeling.
This software is being created to work with FLEXPART and other atmospheric transport model ouput. FLEXPART is a Lagrangian particle dispersion model written by Andreas Stohl. It is in active development at NILU and by Sabine Eckhardt, John Burkhart and numerous other research groups worldwide. For more information on FLEXPART visit the homepage
Contact
A maillist has been set up for users at sourceforge. Please direct inquiries via the pflexible_maillist
Direct inquiries may be sent...
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Soto is a graphical message debugger for simpleIPC. In addition to displaying the message traffic between processes, it can log and play back this traffic. Soto also provides the ability to design GUI "panes" that are populated with data from messages.
Weather-fetching software for Symbian S60 cell phones which shows the current weather and weather forecast at the 'Standby' screen. Multi-language, skinnable interface, different weather info sources and other adjustments.
Software package for stochastic and hybrid simulation of microtubule dynamics and the effects of anti-mitotic drugs and microtubule regulatory proteins.
The co-simulation adapation platform serves as programming framework and middleware to enable coupling of distributed, heterogeneous numerical models. The framework facilitates the adaptation and integration of new sub-models into a common simulation platform.
The 3D Slicer is freely available, open-source software for visualization, registration, segmentation, and quantification of medical image data. Follow the link for more info: http://slicer.org
PixLab is a peculiar raster-based graphic editor giving one more additional drawing aspect to an artist. Not only traditional elements of painting, such as color and shape, but also artist's brush dynamics is fixed and displayed.
Cellicone is a project to develop an artificial life organism with the necessary components to make it comparable to biological life as we know it. This includes components ranging from proteins to cells to organs to limbs, and many steps between.
RGnome is a gtk based frontend for GNU R, which is a widely used language for statistical computing. It features a fully working R console and an editor with syntax highlighting.
Agaseous-NES is a graphic app for creating integrated circuit layers. Developers can import Agaseous for SuperWikia Alpha .AJA (Agaseous Joint Application) text files to automate & create asauna plates. Also imports and intergrate Adobe .PSD files.