SPedit is a new curation environment for the Swiss-Prot and TrEMBL databases. For more information about these databases see http://www.expasy.ch/sprot/ and http://www.ebi.ac.uk/swissprot/
Raytracing rendering engine written in Java. Plug it into a modeling environment, or programmatically create a scene. Uses Constructive Solid Geometries (CSG), bounding boxes, and fully extensible design (at least eventually).
The jXUL project is an open source project to integrate the XUL language into the Java Platform. There are multiple ways in which this integration will take place. In fact, this project will expand as its members find new ways to integrate these two techn
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Eidola is a representation-independent programming language. This project supports the language core, including the semantics and the reference implementation of a kernel. See http://eidola.org/ for for information.
An extensible TIFF codec for Java 1.2 Advanced Imaging, allowing for
extended compression types, writing tiled images etc. Used by GeoTIFF-JAI
project.
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An object oriented Java package that can be used to store 3-D graphs and perform various functions on them, arranging nodes with a spring embedder and generating VRML output. Visit http://vrmlgraph.i-scream.org.uk for documentation and examples.
This project provides software resources for creating solid models of proteins that can be printed on color 3D printers. The main focus is a java program that reads in a PDB file and produces a PLY format stick representation of the protein.
Infomap is a Java component for displaying and manipulating nodal data. It gives the user the ability to visualize large graph or tree structures by means of expanding and collapsing portions of the structure and by easily zooming in and out.
ASSET is an open source Java application providing support to the modelling of maritime tactics. User-defined performance files can be used to replace the generic data used for ships, submarines, weapons, sensors, and helos.
NetGraph is a collection of java classes and beans that can visualize common network and dependency graphs. These graphs are built of nodes and connections between the nodes. See homepage for details.
The purpose of the project is to develop a quantitative medical imaging & visualization program for use on brain MR, DTI and MRS data. It is a joint project of the Kennedy Krieger Institute & the Johns Hopkins University, Psychiatric Neuroimaging Lab
JNeuron is an analysis tool for multi-neuronal spike train analysis. The tool will allow scientists to organize their spike train data analysis into projects. The tool will implement standard spike train analysis algorithms and also datamining algorithms
jlpv is a Java Light PACS Viewer application useful for review series or images from DICOM data retrieved from the DCM4CHEE PACS system. It also uses ImageJ as a rendering engine or viewer. This project is in a early stage.
Ged(Pluginable Graph Editor) is modern visual Graph Editor, written on java, with pluginable interface for different algorithms on graph's and different graph's formats.
A self-sufficient java framework for numerical solution of ODEs (diff eqs) and visualization. Samples are aeronautics/astronautics/physics/rocketry themed. Focus on clean design, modularity, reusability and documentation. Educational project.
Simple editor and analyzer of Petri nets. It allows you to build reachability tree with/without instant transitions and Markov chains. It is also possible to set transition distributions and set all the parameters of the current distribution.
This project was made as a course project at NTUU "KPI" during attending classes "Computer modelling".
Feel free to make any changes to the current version or ask me if you have any question.
SCTMF is an in development progress software aimed to educational learning of Formal Models, used in Computer Theory course.
The meaning of SCTMF is Sistema para Criação e Testes de Modelos Formais (Formal Model Creation and Tests System).