Search Results for "java projects on linux" - Page 12
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Showing 951 open source projects for "java projects on linux"
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The Bio2RDF project aims to transforms silos of life science data into a globally distributed network of linked data for biological knowledge discovery. Bio2RDF creates and provides machine understandable descriptions of biological entities using the RDF/RDFS/OWL Semantic Web languages. Using both syntactic and semantic data integration techniques, Bio2RDF seamlessly integrates diverse biological data and enables powerful new SPARQL-based services across its globally distributed knowledge bases.
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** Deprecated ** Important! All of the software on this web site has been deprecated, and has not been maintained since 2014. All of this software is now being maintained on Github - and can be obtained from https://github.com/jpaulm . Changes and enhancements are still ongoing, and while older software should still work, newer features described in the literature will not be available in SourceForge. The old license was the Artistic license - the software is now in process of...
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Step-by-step instructions for making your HVAC (Heating, Ventilation & Air Conditioning) system state-of-art. Covers airflow balancing, temperature control & zoning, energy conservation measures, remote access, 1-wire, XBee devices, home automation
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BIRT Report Designer
Open Source Reporting & Data Visualization Platform
BIRT is an open source technology platform used to create data visualizations and reports that can be embedded into rich client and web applications. Developers who use BIRT Designer are able to access information from multiple data sources easily and quickly in order to create reports and applications with stunning data visualizations. Actuate now provides a free report server, BIRT iHub F-Type, to deploy BIRT content so developers don't have to build their own infrastructure. With a... -
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Coulson Plot Generator
Graphics generator for pie diagram matrix from spreadsheets
For comparative plus/minus spreadsheet data, Coulson Plot Generator application creates a multiple pie diagram, for a rapid visual comparison of subunit occupancy across a range of entities. Numbers of pies, segments, labels and colours are customisable. Creates an editable PDF from a comma separated text file. Now with zoom capability and more memory, for larger datasets. Save images in several formats including SVG. -
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CIG-P
CIG-P is a simple yet flexible data visualization tool
CIG-P is a higher order visualization tool for AP-MS which generates intuitive circular diagrams for visually appealing final representation of AP-MS data. CIG-P can be used to compare a) different AP-MS datasets of various baits or b) a particular bait under various perturbations (lenticular section CIG-P). The output of CIG-P is a simple and intuitively easy to grasp visualization of a complex dataset. Publication: CIG-P: Cicular Interaction Graph for... -
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OGSA-DAI is a product that allows data resources, such as file collections, relational or XML databases, to be accessed, integrated and federated across the Internet.
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Graphical Grammar Studio
An user friendly grammar tool for natural language processing tasks
Full documentation with tutorials is included in the download package. Graphical Grammar Studio is a tool for applying grammars which behave as words acceptors/consumers and annotators. GGS grammars can be used to find and annotate sequences of words which respect certain conditions, in a given input. Its purpose is for creating NLP tools like phrase chunkers, named entity finders, pronoun co-reference solvers etc. A grammar is represented by a state machine which can be visualized, edited... -
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Tockit tries to build a framework for Conceptual Knowledge Processing (CKP) and Formal Concept Analysis (FCA) in Java, using a component-based approach, XML formats and a three-tier architecture.
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This library aims to provide support for D-dimensional images in Java and to enable high-level implementation of algorithms in dimensionally-invariant manner. Major features: the dimensionality and the access to primitive data types are abstracted.
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RDF Content Provider for iQser GIN
Plugin to connect RDF sources with the GIN Server
GIN Server is a semantic middleware for easy data integration and automized analysis. The extendable architecture allows to plugin in data sources, analytics and event handling. This RDF Content Provider enables access to Semantic Web Content as an RDF file or SPAEQL endpoint. -
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The Secret of NIM
An easy way to remerber NIM logic
The Secret of NIM is a software writen in PHP/MySQL and JavaScript. It shows a graphical representation of a logic scheme with wires connecting logic modules which have specific parameters. This software has been developped for NIM/TTL logic, thus his simplicity allows also the representation of other logic systems, numeric systems or analogic systems i.e. the pedal board of an electric guitar. The Secret of NIM is divided in two parts. The first one is the main part of the software. It... -
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di-date-dimension-plugin
Pentaho Data Integration plugin to supply to resolve date dimension
Pentaho Data Integration plugin to supply a function to resolve, and insert if it doesn't exist, the date dimension. It calculates all calendar data and you must supply the table info used to save the information. -
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di-history-join-plugin
Plugin for Pentaho Data Integration used to supply a method to join tw
This plugin supply a method to join two tables using the date-from and date-to history. It use the two dates that indicate the life of the record and join using a query (like the database join plugin) to resolve the record's story of the two entities. -
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xSonify
Java-based sonification data analysis
xSonify is a Java-based sonification data analysis prototype for displaying science data as sounds, with an emphasis on supporting visually-impaired researchers. Alternatives include Sonification Sandbox <http://sonify.psych.gatech.edu/research/>, MathTrax and Earth Plus <http://prime.jsc.nasa.gov/>, Sonifyer <http://www.sonifyer.org> and SoniPy <http://sourceforge.net/projects/sonipy/>. -
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cy2fluxviz
cy2fluxviz : Cytoscape 2 plugin for flux distribution visualization
cy2fluxviz - Cytoscape 2 Plugin for the visualization of flux distributions in networks. Latest releases from https://github.com/matthiaskoenig/cy2fluxviz -
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A 3D engine written in Java aimed at students of computer science. This engine makes it very easy to visualize objects and create 3D applications.
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A math application written in Java. Its features include 2D and 3D graph plotting, scripting, user-defined variables and functions and skinnable GUI. This project is not maintained at the moment.
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DSOL
DSOL: A Distributed Simulation Object Library implemented in Java
DSOL is a full featured multi-formalism, distributed simulation environment developed at Delft University of Technology (The Netherlands). DSOL has support for discrete event and for continuous modeling. Formalisms supported are event scheduling, DEVS, flow-based simulation, and continuous modeling through sets of differential equations. The first release was introduced at IEEE's Winter Simulation Conference in 2002. Since then, numerous papers and PhD dissertations have been developed, with... -
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Framework for text mining, data integration and data analysis. Keywords: ontology and graph alignment, relation mining, warehouse, semantic database integration, bioinformatics, systems biology, microarray, Java.
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HW SOM
SOM - Self-Organizing Maps of Teuvo Kohonen
It's a "Hello World" implementation of SOM (Self-Organizing Map) of Teuvo Kohonen, otherwise called as the Kohonen map or Kohonen artificial neural networks. -
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Ondex Web
Web-based visualisation of networks using Java
Ondex Web is a new web-based implementation of the network visualization and exploration tools from the Ondex data integration platform. New features such as context-sensitive menus and annotation tools provide users with intuitive ways to explore and manipulate the appearance of heterogeneous biological networks. Ondex Web is open source, written in Java and can be easily embedded into Web sites as an applet. Ondex Web supports loading data from a variety of network formats, such as XGMML,... -
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TOPS_CeMM
User Friendly Data Analysis Tool for Interaction Data
TOPS provides the benchtop scientist with a free toolset to analyze, filter and visualize data from functional genomic gene-gene and gene-drug interaction screens with a flexible interface to accommodate various different technologies and analysis algorithms in addition to those already provided here. -
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Cylindrical BLAST Viewer
Alignments in Rotating Cylinder / 3D
3D viewer which arranges BLAST hits and other bioinformatics-related alignments in a rotating, cylindrical display. Feedback appreciated. NOTE: requires Java3d installation. Superceded by Cylindrical Alignment App -
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Big Sack
Big Sack: A lightweight Java Key/Value store with undo and disk cache.
Big Sack is a Java persistence mechanism that allows storage of key value pairs following the popular Big Data paradigms. Its a very simple and straightforward way to bridge the gap between in-memory data structures and long-term storage. It has the convenience of Java SDK TreeMap and TreeSet classes and is used the same easy way, but it includes rollback through undo logging to checkpoint data so it does not wind up in an unknown state regardless of failures. Data storage in the exabyte...
