Search Results for "processing" - Page 7
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Showing 273 open source projects for "processing"
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Atera all-in-one platform IT management software with AI agentsAtera’s AI agents don’t just assist, they act. From detection to resolution, they handle incidents and requests instantly, taking your IT management from automated to autonomous.
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Free and Open Source HR SoftwareGive your HR team the tools they need to streamline administrative tasks, support employees, and make informed decisions with the OrangeHRM free and open source HR software.
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horizon
Horizon is a realtime, open-source backend for JavaScript apps
...While technologies like RethinkDB and WebSocket make it possible to build engaging realtime apps, empirically there is still too much friction for most developers. Building realtime apps now requires understanding and manually orchestrating multiple systems across the software stack, understanding distributed stream processing, and learning how to deploy and scale realtime systems. The learning curve is quite steep, and most of the initial work involves boilerplate code that is far removed from the primary task of building a realtime app. -
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Visualization of Protein-Ligand Graphs
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/ -
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SPRITE
Parallel SNP detection pipeline
SPRITE is an open-source software package providing a parallel implementation of the Single Nucleotide Polymorphisms (SNP) detection genomic data analysis workflow. It consists of three tools: PRUNE for read alignment, SAMPA for intermediate file processing, and PARSNIP for parallel SNP calling. -
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Open Cezeri Library
Effective Linear Algebra and Computer Vision Library with JAVA
OCL stands for Open Cezeri Library (yet another linear algebra and matrix library). This library provides rapid coding as matlab ease of use. To learn for library please try to use test examples at OpenCezeriLibrary\test\test. It is originally developed at el-cezeri laboratory of Siirt University, in order to establish generic framework of reusable components and software tools for machine vision, machine learning, AI and robotic applications. Currently, it holds following main concepts 1-... -
Electronic Lab Notebook (ELN) SoftwareeLabJournal is an all-in-one Electronic Lab Notebook (ELN) software that includes sample tracking and protocol management modules.
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IAP.G2P
IAP - the Integrated Analysis Pipeline
The Integrated Analysis Platform (IAP) has been designed and developed to support the analysis of large-scale image data sets of different camera systems. It aims in bridging different data domains and in integrating different approaches to data analysis and post-processing. -
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Tigris is an open source suite of classes and programs implemented in C++ for single particle electron microscopic image processing.
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SPIW - Scanning Probe Image Wizard
Scanning Probe Image Wizard - MATLAB Toolbox
SPIW is a MATLAB toolbox, for automated processing of scanning probe microscope images. Tools are applicable to all SPM images, but the main focus is on images with atomic or molecular resolution. SPIW is primarily a MATLAB toolbox with functions designed to be called in a user's own script. SPIW also has a very basic GUI for browsing and exporting images. For information on SPIW's performance see our publication ( http://dx.doi.org/10.1063/1.4827076 ) in the Review of Scientific Instruments. ... -
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PANorama2.0
PANorama: Panicle phenotyping for Oryza sativa
PANorama is a Linux-compatible, open-source software package for panicle image acquisition, processing, and phenotyping. PANorama 2.0 contains new phenotype measurements and is available for download within the "Files" tab listed above. Installation and user instructions are located within the "Wiki" tab. How to videos are available for streaming at the link below, or for download in the "Files" tab above. Information regarding the project and funding can be found at http://ricediversity.org, and within the corresponding publications and how-to videos: How to videos: http://vimeo.com/cornellricelab PANorama1.0 (Crowell et al. 2014): http://www.plantphysiol.org/content/165/2/479.short PANorama2.0 (Crowell et al. 2016): (http://goo.gl/vQux5Z) -
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libsombrero
Astronomical object/structure detection from 1D and 2D data sets.
Sombrero is a fast wavelet image processing and object detection C library for astronomical images. Sombrero is named after the "Mexican Hat" shape of the wavelet masks used in image convolution and is released under the GNU LGPL library. -
High-performance Open Source API GatewayKrakenD is a high-performance API Gateway optimized for resource efficiency, capable of managing 70,000 requests per second on a single instance. The stateless architecture allows for straightforward, linear scalability, eliminating the need for complex coordination or database maintenance.
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cleap is a a library for handling / processing / rendering 3D meshes. It uses GPU accelerated methods.
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BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional, multi data channel, time series image data from microscopy and other sources.
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Sample Level Musical Timeline
Sample Level Modulation of Musical Timeline
Sample Level Modulation of Musical Timeline Mingfeng Zhang Dept. of Electrical and Computer Engineering, University of Rochester In this toolbox we provide signal processing tools to allocate music events (samples of musical notes) to specified time locations with sample level accuracy. In this implementation, we use computational tools to add in micro-timing variations in J.S. Bach four-part chorales as a "visualizer" for big data. By extracting data patterns from multiple time scales, we implement a tool that musicians can perform the big data at different resolutions. ... -
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iSBatch
Hyearchical Data Processing Plugin for ImageJ
iSBatch is a Java-based plugin for ImageJ (version 1.49d) or its distribution Fiji. iSBatch is designed for quick evaluation of analysis pipelines and visual exploration of datasets. It is distributed under an open open-source license (GNU General Public License, version 3). The plugin handles the data in a hierarchical fashion based on a source folder containing all data and little guidance provided by the user. The software is designed for rapid exploration of large datasets and... -
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scipion-xmipp
Image processing framework to integrate EM software packages.
...Xmipp is a well-known package in the EM image processing. It is integrated into Scipion and contains the algorithms in the core libraries and command line programs. -
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MindRaider
MindRaider is a personal notebook and outliner.
MindRaider is a personal notebook and outliner. Where do you keep private remarks like ideas, plans, gift tips and howtos? Loads of documents and remarks spread around the file system? Can you find a remark when you need it? No? Try MindRaider! -
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wspa
Web Scanning Probe Analysis - a web-based tool for SPM data processing
Web Scanning Probe Analysis - a web-based tool for data from SPM (STM, AFM), based on gnudatalanguage. - web-based interface for data management and processing - multiple data formats supported (GXSM, WSXM, Omicron SCALA, Createk) - unified, editable filtering of images, highly versatile -
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JBerd
Java tools for decoding and manipulating BER encoded ASN.1 Files
...An "awk" for ASN.1 BER (for Unix people) or maybe a "notepad" for ASN.1 BER (for Windows people). Jberd (Java BER decoder) is a lightweight BER decoder and associated tools for interpreting and processing BER encoded ASN.1 files. The following facilities are provided: • JBerd Profiler. A tool for profiling the contents of BER encoded files • JBerd Flattener. A tool for converting BER encoded files to flat files for processing by other facilities • JBerd Decoder objects. A set of Java facilities for writing BER applications that require BER decoding Go to the "files" section (link at the top of this page) to download a pdf of detailed documentation. ... -
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Apache Kafka
Mirror of Apache Kafka
...Producers append records to partitions, brokers replicate them for durability, and consumer groups read them at their own pace while balancing work across instances. The commit/offset model and retention policies support patterns from real-time processing to event sourcing and audit trails. Exactly-once processing semantics, idempotent producers, and transactions help prevent duplicates across complex dataflows. Kafka Streams and Kafka Connect extend the core: Streams provides a library for stateful stream processing within applications, while Connect standardizes integration with external systems. ... -
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flow visualization toolbox
matlab 2D image processing GUI toolbox for flow visualization
A general flow visualization Matlab toolbox for image processing of some common planar/surface visualization techniques from PLIF (Planar laser induce fluorescence) for tracer distribution, BOS (background oriented Schlieren) for density, TSLC (Temperature sensitive liquid crystal) for thermal and PSP (Pressure sensitive paint) pressure distribution measurement. This work is part of author's PhD study, under Dr S. -
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iMir
Integrated pipeline for HT miRNA-Seq data analysis
Processing of smallRNA-Seq data to gather biologically relevant information requires application of multiple statistical and bioinformatics tools from different sources, each focusing on a specific step of the analysis pipeline. The analytical workflow can be challenging for the continuous interventions by the operator, a critical factor when large numbers of datasets need to be analyzed at once. -
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PRADA
PRADA : Pipeline for RNA-Sequencing Data Analysis
Massively parallel sequencing of cDNA reverse transcribed from RNA (RNASeq) provides an accurate estimate of the quantity and composition of mRNAs. To characterize the transcriptome through the analysis of RNA-seq data, we developed PRADA. PRADA focuses on the processing and analysis of gene expression estimates, supervised and unsupervised gene fusion identification, and supervised intragenic deletion identification. PRADA currently supports 7 modules to process and identify abnormalities from RNAseq data: preprocess: Generates aligned and recalibrated BAM files. expression: Generates gene expression (RPKM) and quality metrics. ... -
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VisualPerspective
A diagram/modeling tool.
VisualPerspective is a modeling and diagram creation tool. It enables to create free diagrams but also semantic oriented ones (for instance UML diagrams), in order to run automatic processing (transformations, exports, parsing). There is currently no installer, so you should follow this procedure : http://enzweiler.info/visualperspective/002-installation.html You are very welcome to report any issue with VP. -
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TeleScope
XML Data Stream Broker/Replicator
TeleScope is the efficient intensive-load XML data stream broker, replicator and simple event processing platform (SEP) written in C for the Fedora 17-18, Slackware 13-14, Red Hat Enterprise Linux 6 (RHEL-6) Linux distributions. The platform is intended to be operated upon the single number/word values and is not meant to be deployed for full-text XML stream analysis. TeleScope has internal query language with a set of standard logical operators that allows to construct relatively complex query expressions. ... -
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Larch: Data Analysis for X-ray Spectra
Data Processing and Analysis for X-ray Spectroscopy and More
Larch is a scientific data processing language that is designed to be easy to use for novices and complete enough for advanced data processing and analysis. Larch provides a wide range of functionality for dealing with arrays of scientific data, and basic tools to make it easy to use and organize complex data. Larch has been primarily developed for dealing with x-ray spectroscopic and scattering data, especially the kind of data collected at modern synchrotrons and x-ray sources. ...
