Showing 3619 open source projects for "hash-linux"

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  • 1
    Zika-RNAseq-Pipeline

    Zika-RNAseq-Pipeline

    An open RNA-Seq data analysis pipeline tutorial

    RNA-seq analysis is becoming a standard method for global gene expression profiling. However, open and standard pipelines to perform RNA-seq analysis by non-experts remain challenging due to the large size of the raw data files and the hardware requirements for running the alignment step. Here we introduce a reproducible open source RNA-seq pipeline delivered as an IPython notebook and a Docker image. The pipeline uses state-of-the-art tools and can run on various platforms with minimal...
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  • 2
    horizon

    horizon

    Horizon is a realtime, open-source backend for JavaScript apps

    Horizon is an open-source developer platform for building sophisticated realtime apps. It provides a complete backend that makes it dramatically simpler to build, deploy, manage, and scale engaging JavaScript web and mobile apps. Horizon is extensible, integrates with the Node.js stack, and allows building modern, arbitrarily complex applications. While technologies like RethinkDB and WebSocket make it possible to build engaging realtime apps, empirically there is still too much friction for...
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  • 3

    Jedule

    Jedule is Yet another Gantt Chart Viewer

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  • 4
    PyVib2 is a program for analyzing vibrational motion and vibrational spectra. It is an open source "all-in-one" solution for scientists working in the field of vibrational spectroscopy (Raman and IR) and vibrational optical activity (ROA and VCD).
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  • 5

    iCubing

    Several OLAP algorithms, data structures and HPC OLAP versions

    OLAP technology is very useful for decision makers and data mining tools with BIG data. In this direction, we implement iCubing project with several multidimensional data cube approaches for cube indexing, querying, updating and mining. There are also several cube types, i.e. alphanumeric cubes, text cubes with unstructured data and geo cube with geo types, dimensions, measures and hierarchies, so the OLAP area continues a hard challenge after more than 20 years of the seminal paper of Jim...
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  • 6

    MerDAQ

    A DAQ solution in Python 2 for your Ardruino

    MerDAQ is a data acquisition GUI and other tools for collecting and storing time dependent. Originally designed to collect 4 temperature data vs. time and plot one of the temperatures in real time with matplotlib. Ideal for use with Arduino.
    Downloads: 1 This Week
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  • 7
    RadCristaOS
    Freeware radionic* operating system (rOS) for usb-carriers. The installation is enough to unpack the archive to any such carrier and inserted into the usb-connector to gain access to it. In contrast to the classical understanding of the term "operating system", this product is a non-material (mental) set of programs based on advanced artificial intelligence, a virtual person pretending pretty girl - Crista.
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  • 8
    ulogme

    ulogme

    Automatically collect and visualize usage statistics in Ubuntu/OSX

    ulogme is a local activity-tracking tool for visualizing how computer time is spent throughout the day. It records the title of the active window and the frequency of key presses, then turns those logs into interactive HTML timelines. Users can add notes to specific moments or summarize an entire day for additional context. Everything is stored and processed locally rather than uploaded to a remote service. Its browser interface is built with HTML, CSS, JavaScript, and D3 and supports both...
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  • 9
    Syntainia
    The objective of this project is to provide an innovative tool for visualization of multiples genomes. Written in Java, it presents a simple and intuitive user interface to view and manipulate the relationships between groups of genes.
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  • 10
    FalansterCity3D

    FalansterCity3D

    3D urban environment renderer : browser-app ; as well as a GTA clone

    Have You ever wondered what would be like the weirdest Grand Theft Auto clone ever made? Well, we are pretty close with the FalansterCity3D urban environment rendering-engine where You can also drive the cars in the city. And moreover, it's a browser-game, so it runs instantly in any internet-browser. Why not try it directly at the link below? http://nerdofalgorithms.altervista.org/secondary_pages/page_11.php Even on smarthones or whatever, as long as it has a browser and sufficient...
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  • 11
    SHORE is a Next Generation Sequencing data analysis suite. Please find the manual at http://shore.sourceforge.net/wiki
    Downloads: 2 This Week
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  • 12
    XASTIR

    XASTIR

    Multiplatform Ham Radio APRS and Mapping Program

    ...The version you can download here has been obsolete for over 10 years, and other than by deleting the project entirely we can't disable the "Download Now" button. Don't download from here. Go to github. Real-time tracking & messaging of stations via radio/internet APRS data streams, w/125 map formats supported. Linux/FreeBSD/Solaris/MacOSX/Windows in any of 7 languages. Can also be used for mobile mapping w/GPS. MAILING LISTS ARE AT: PROJECT->WEB SITE.
    Downloads: 16 This Week
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  • 13
    Evita is a prototype system for the exploration of terascale dataset by using a a wavelet-based representational scheme allowing ranked access to macroscopic data features.
    Downloads: 1 This Week
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  • 14

    Nova

    Astronomical Image Solver with Telescope Pointing

    Nova is a simple astronomical image solver. It can currently open FITS files and identify some objects against star catalog objects.
    Downloads: 0 This Week
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  • 15
    Visualization of Protein-Ligand Graphs

    Visualization of Protein-Ligand Graphs

    Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools

    NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/
    Downloads: 0 This Week
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  • 16
    Yggdrasill

    Yggdrasill

    3D Evolutionary Tree Visualization

    Yggdrasill is a 3D phylogenetic tree visualization software based on the Unity 5 engine. Intended for educational and scientific purposes this demonstration release allows to display and explore evolutionary relationships between different terrestrial vertebrate species. Currently available features include procedural tree generation of evolutionary data provided by the Tree of Life (ToL) Web Project (http://tolweb.org/tree/), full three dimensional camera controls as well as a web...
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  • 17

    Crygr

    Compare and visualize charge densities from various file formats.

    This project is a small program using Qt for calculation and visualization of electron charge densities in crystals and molecules. It can create a 2D plane of charge densities or create a 1D representation of the charge densities along a given line, in both cases it can also export the graphical representations to various image formats. The program can import various file formats such as space 3D grids of charge density values, created in a quantum chemistry programs Gaussian, Crystal and...
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  • 18
    Ogles -  OpenGL/OIV  stereotactic tool
    Ogles strives to provide an open source data model for neuroscientific data visualization and analytics. Ogles started out as a planning system for frame based stereotactic neurosurgery. Ogles(1) is discontinued. Release candidate (RC) is Ogles2b. Ogles is accompanied by a simple DICOM reader and NIfTI converting tool (Sdr2).
    Downloads: 2 This Week
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  • 19

    Waterloo

    Java-based scientific graphics

    Java-based scientific graphics with support for Java, Groovy, MATLAB, Python, the R statistical environment, Scala and SciLab.
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    Downloads: 0 This Week
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  • 20
    Plotdrop

    Plotdrop

    minimal GUI for gnuplot

    Plotdrop is a minimal GNOME frontend to gnuplot PlotDrop is designed for quick simple visualisation of 2D data series. It is not intended to encompass anywhere near the full capabilities of gnuplot. Code can be found at: http://github.com/laserjock/plotdrop
    Downloads: 0 This Week
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  • 21

    Tarunyai

    Tool is in development please donot download.Analytics tool

    This tool is still in development phase please donot download for now. Tarunyai data integration prepares and blends data to create a complete picture of your business that drives actionable insights.
    Downloads: 3 This Week
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  • 22

    SPRITE

    Parallel SNP detection pipeline

    SPRITE is an open-source software package providing a parallel implementation of the Single Nucleotide Polymorphisms (SNP) detection genomic data analysis workflow. It consists of three tools: PRUNE for read alignment, SAMPA for intermediate file processing, and PARSNIP for parallel SNP calling.
    Downloads: 0 This Week
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  • 23
    Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutit
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  • 24
    The international SBGN project aims to bring consistency and uniformity to the graphical expression of network diagrams in biology, in the same way that electronic circuit diagrams are standardized in electrical engineering.
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  • 25
    Data Science Specialization

    Data Science Specialization

    Course materials for the Data Science Specialization on Coursera

    The Data Science Specialization Courses repository is a collection of materials that support the Johns Hopkins University Data Science Specialization on Coursera. It contains the source code and resources used throughout the specialization’s courses, covering a broad range of data science concepts and techniques. The repository is designed as a shared space for code examples, datasets, and instructional materials, helping learners follow along with lectures and assignments. It spans...
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