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MoDAVE aims at providing data analysis and visualization extensions to Mosaic datasets, including cubed sphere data, to the Climate Data Analysis Tools (CDATA)
in particular.
Pumilio is a web-based sound analysis and archive system for almost any kind of sound file with tools to see the spectrogram of the sound, select regions for further analysis and insertion in a database, filtering, and many other manipulations.
Our goal is to find out useful and funny ways for expanding the possibilities of many FOSS by integrating them with other FOSS and proprietary systems. You'll find here many open source plugins and extensions useful to put those FOSS hermits together.
Released August 22, 2013
Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44
Linux Kernel Image 3.8.0-29
Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives.
Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated....
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Data analysis and circular statistics with OpenElectrophy and R
Set of tools for basic analysis of electrophysiological data. The Python classes show how to call OpenElectrophy functions and save data. The R library applies circular statistics to spike phase data and saves the best von Mises fit and the Rayleigh statistics on the disk.
The wavelet coherence analysis is done in R by the package "sowas".
PROJECT MOVED: see http://www.vmtk.org for up-to-date information.
Libraries and tools for 3D reconstruction, geometric analysis, mesh generation and surface data analysis in image-based blood vessel modeling.
Cca-forum unifies the Common Component Architecture tools and tutorial. It includes the CCA specifications, the Ccaffeine framework for HPC, and related tools. These support multilanguage scientific and parallel computing.
pyastrolib is a python library providing professional astronomers a robust set of tools for astronomical data analysis. This project will provide all the functionality as NASA's IDL Astronomy User's Library in addition to other planned features.
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--UPDATE-- New Version is now integrated in the official PyMOL plugin repository! --UPDATE--
The BNI (Beyond Normal Interaction)- Tools is a plug in for the PyMOL molecular visualization system which adds additional functionalities and presets to the PyMOL GUI and also adds useful extended commands.
A collection of tools for working with the comparative data analysis ontology including import/export facilities for common phylogenetic file formats, and also a triple-store framework.
Data mines the voting record and other actions of Members of the UK Parliament. Extracts information from the parliament website and stores it in a database. Provides tools to analyse the information, producing statistics and tables about the MPs.
DataSync Suite is an open source platform for integrating tools like Zimbra, SugarCRM, and Drupal. The tool is focused on a single sign-on, application data integration, and fast, flexible deployment.
MBDyn_sim_suite is a collection of free pre&post-processing tools and simulation models for the open-source multi-body analysis software MBDyn forming a general purpose simulation environment for structural dynamics with an emphasis on wind turbines.
The Scientific Visualization Artist Tools (SVAT) include converters from the Visualization Toolkit (VTK) to RenderMan Interface Bytestream (RIB) (ASCII and binary files supported), Blender to RenderMan, compilable RenderMan shaders and other utilities.
The Model Interaction Environment for Neuroscience provides tools for development, searching, editing, execution, and visualization of biophysical models, abstract mathematical models, and experimental protocols used in neuroscience research.
PyPlotSuite aims to provide immediate, easy-to-use, GUI tools to display, analyze and create publication-quality 2D plots of 1D data series, images, 2D arrays. This project is based on (and would not exist without) pygtk, matplotlib and numpy.
This is a tool to organize and present complex, interrelated ideas visually in different ways. It aims to be many tools all at the same time -- outliner, mindmapping and concept mapping tool, PIM, project manager and tracker, literate programming editor,