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The Hanalyzer is a tool designed to help biologists explain results observed in genome-scale experiments and to generate new hypotheses. It combines information extraction, semantic data integration, reasoning, and visualization.
Musical Notation System
Using a GUI with a built in text editor, one can create a score with the appropriate notations. All musical notations are then transformed into a graphical representation and can be exported into various formats (pdf, ps, eps).
This project is the development of a Selection Tool primarely used in ImageJ and possibly in GIMP. It is based in LiveWire and SNAKES methods and will firstly be used in IVUS (intravascular ultra sound) images.
DemoScript runs commandline-based demos. It logs to a remote host (ssh), writes the password, and then writes the commands specified in a script. The tool mimics someone's typing: delay between each letter and intelligent command sending synchronisation.
Software tools for building interactive information visualization applications. Prefuse supports a rich set of features for data modeling, visualization, animation, and interaction for both Java (prefuse) and Flash (prefuse flare).
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The application „StockNews“ is to offer the possibility to the user to find out about the interaction between news, analyst opinions and stock exchange rates. Statistics and other relevant data about enterprises are available.
Goal of our project CSX (City Stats X) is to program a generic interface to visualize and present social data about a city. We will present this on the example of the city of Linz in Austria.
Java package to study a clustering model described in the paper \"Novel Clustering Algorithm Based Upon Games on Evolving Network\" by Q. Li, Z. Chen, Y. He and J-P. Jiang (in arxiv: http://arxiv.org/pdf/0812.5064v1), generalizations and similar issues.
deegree is a Java framework for geospatial software based on the specifications of the OpenGIS Consortium and the ISO. The focus is based on the realisation of OGC specified web services. It is developed in cooperation between lat/lon and the University of Bonn.
JRubik is a set of tools for navigating and reporting over OLAP Datasources, mainly Mondrian and XMLA servers. This project is based on the components developed by the JPivot project.
GParticles is a tool to simulate the growth behaviour of two- and three-dimensional nano particles based on a simple grid model, with adjustable (time-dependent) concentrations of the particle's different components.
Orthogonal (a.k.a manhattan) line routing is
a technique for rendering a human-readable
hierarchical diagram. Manhattanlines
implements an orthogonal line routing algorithm
that minimizes line length and crossings.
ProteinShader is a molecular visualization tool that can produce illustrative renderings of proteins that approximate what an artist might create using pen and ink. This free platform-independent program is written in Java and OpenGL Shading Language.
Developed in Java programming language, this software lets its users view and manipulate hierarchical data structures represented as a hyperbolic trees.
CallMesh is an eclipse plugin visualizing call graphs in java projects with the help of the zest toolkit. It allows easy navigation around you classes. Additionally, call graphs can be exported as dot-files as understood by graphvis.
MathMLWYSIWYGEditor allows users to generate mathematical, physical and engineering formulas using the mathematical markup language, MathML. Requires hardly any knowledge on MathML.
An extension package to Pentaho Data Integration, providing plug-ins. Steps/job entries can be downloaded independently and each comes with source code in the .zip file. All are licensed as LGPL or GPL.